ATTED-II : GeneCoexpression result

Species	Gene	Description
zma-u.5	100284014	uncharacterized LOC100284014
zma-r.6	100284014	uncharacterized LOC100284014
zma-m.5	100284014	uncharacterized LOC100284014
sbi-r.1	8071450	uncharacterized LOC8071450
osa-u.5	4349652	zeaxanthin epoxidase, chloroplastic
osa-u.5	4351372	uncharacterized LOC4351372
tae-r.2	123091640	uncharacterized LOC123091640
tae-r.2	123086418	zeaxanthin epoxidase, chloroplastic
tae-r.2	123096532	uncharacterized LOC123096532
hvu-r.1	123448102	uncharacterized LOC123448102
bdi-r.1	100835270	uncharacterized LOC100835270
ath-u.5	AT2G21530	SMAD/FHA domain-containing protein
gma-u.5	100808269	FHA domain-containing protein
sly-u.5	101252420	zeaxanthin epoxidase, chloroplastic
bra-r.6	103842515	uncharacterized LOC103842515
vvi-u.5	100263360	uncharacterized LOC100263360
ppo-u.5	18102211	uncharacterized LOC18102211
ppo-u.5	7478591	zeaxanthin epoxidase, chloroplastic
mtr-u.5	11435952	uncharacterized LOC11435952
ghi-r.1	107959255	uncharacterized LOC107959255
ghi-r.1	121229279	uncharacterized LOC121229279
bna-r.1	106410598	uncharacterized LOC106410598
bna-r.1	106415175	uncharacterized LOC106415175
sot-r.1	102598914	uncharacterized LOC102598914
cit-r.1	102627328	uncharacterized LOC102627328
nta-r.1	107817814	uncharacterized LOC107817814
nta-r.1	107790586	uncharacterized LOC107790586
cre-r.1	CHLRE_12g534450v5	uncharacterized protein

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

GO:0005515 [list] [network] protein binding

(4389 genes)

IEA

Protein

NP_001358903.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 8, chlo_mito 5, mito 1

(predict for NP_001358903.1)

Subcellular
localization
TargetP

chlo 9

(predict for NP_001358903.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	zma-u.5 for 100284014	zma-r.6 for 100284014	zma-m.5 for 100284014	sbi-r.1 for 8071450	osa-u.5 for 4349652	osa-u.5 for 4351372	tae-r.2 for 123091640	tae-r.2 for 123086418	tae-r.2 for 123096532	hvu-r.1 for 123448102	bdi-r.1 for 100835270	ath-u.5 for AT2G21530	gma-u.5 for 100808269	sly-u.5 for 101252420	bra-r.6 for 103842515	vvi-u.5 for 100263360	ppo-u.5 for 18102211	ppo-u.5 for 7478591	mtr-u.5 for 11435952	ghi-r.1 for 107959255	ghi-r.1 for 121229279	bna-r.1 for 106410598	bna-r.1 for 106415175	sot-r.1 for 102598914	cit-r.1 for 102627328	nta-r.1 for 107817814	nta-r.1 for 107790586	cre-r.1 for CHLRE_12g534450v5

Ortholog

Ortholog ID: 9394

Species

zma

sbi

osa

tae

hvu

bdi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

Function^*

uncharacterized LOC100284014

uncharacterized LOC8071450

zeaxanthin epoxidase, chloroplastic

uncharacterized LOC4351372

uncharacterized LOC123091640

zeaxanthin epoxidase, chloroplastic

uncharacterized LOC123096532

uncharacterized LOC123448102

uncharacterized LOC100835270

SMAD/FHA domain-containing protein

FHA domain-containing protein

zeaxanthin epoxidase, chloroplastic

uncharacterized LOC103842515

uncharacterized LOC100263360

uncharacterized LOC18102211

zeaxanthin epoxidase, chloroplastic

uncharacterized LOC11435952

uncharacterized LOC107959255

uncharacterized LOC121229279

uncharacterized LOC106410598

uncharacterized LOC106415175

uncharacterized LOC102598914

uncharacterized LOC102627328

uncharacterized LOC107817814

uncharacterized LOC107790586

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00195	Photosynthesis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00195	Photosynthesis	3
osa00860	Porphyrin metabolism	3
osa00900	Terpenoid backbone biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00860	Porphyrin metabolism	4
osa00900	Terpenoid backbone biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00710	Carbon fixation by Calvin cycle	5
tae01200	Carbon metabolism	5
tae00030	Pentose phosphate pathway	3
tae01230	Biosynthesis of amino acids	3
tae00195	Photosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00710	Carbon fixation by Calvin cycle	3
tae01200	Carbon metabolism	3
tae00030	Pentose phosphate pathway	2
tae01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00710	Carbon fixation by Calvin cycle	6
tae01200	Carbon metabolism	6
tae00030	Pentose phosphate pathway	4
tae01230	Biosynthesis of amino acids	4
tae00010	Glycolysis / Gluconeogenesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00195	Photosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00195	Photosynthesis	4
ath01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00195	Photosynthesis	6
gma00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly01200	Carbon metabolism	10
sly00710	Carbon fixation by Calvin cycle	9
sly00030	Pentose phosphate pathway	4
sly00010	Glycolysis / Gluconeogenesis	3
sly00051	Fructose and mannose metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00710	Carbon fixation by Calvin cycle	2
bra01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03010	Ribosome	10
vvi00860	Porphyrin metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00195	Photosynthesis	5
ppo00710	Carbon fixation by Calvin cycle	2
ppo01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00195	Photosynthesis	6
ppo00710	Carbon fixation by Calvin cycle	2
ppo01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00195	Photosynthesis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00195	Photosynthesis	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00195	Photosynthesis	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot01200	Carbon metabolism	2
sot00195	Photosynthesis	2
sot00196	Photosynthesis - antenna proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03010	Ribosome	5
cit00195	Photosynthesis	2
cit01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03010	Ribosome	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03010	Ribosome	5
nta00195	Photosynthesis	2
nta00710	Carbon fixation by Calvin cycle	2
nta01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre00195	Photosynthesis	2

Expression

Expression pattern

Entrez Gene ID^*

100284014

8071450

4349652

4351372

123091640

123086418

123096532

123448102

100835270

816692

100808269

101252420

103842515

100263360

18102211

7478591

11435952

107959255

121229279

106410598

106415175

102598914

102627328

107817814

107790586

5718516

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 100284014 (zma-u.5 coexpression data)

Top 50 enrichment test to 100284014 (zma-u.5 coexpression data)


Species	zma	sbi	osa	tae	hvu	bdi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	3	1	2	3	1	1	1	1	1	1	1	2	1	2	2	1	1	2	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100284014 (zma-u.5 coexpression data)

Top 50 enrichment test to 100284014 (zma-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**