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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100305496   S-adenosylmethionine-dependent methyltransferase superfamily protein 
 gma-r.7   100305496   S-adenosylmethionine-dependent methyltransferase superfamily protein 
 gma-m.5   100305496   S-adenosylmethionine-dependent methyltransferase superfamily protein 
 gma-u.5   100814496   uncharacterized LOC100814496 
 mtr-u.5   11424575   uncharacterized LOC11424575 
 ppo-u.5   7479516   uncharacterized LOC7479516 
 ath-u.5   AT2G41950   DNA-directed RNA polymerase subunit beta 
 vvi-u.5   100267633   uncharacterized LOC100267633 
 sly-u.5   101264102   uncharacterized LOC101264102 
 osa-u.5   4332127   uncharacterized LOC4332127 
 zma-u.5   100191713   uncharacterized LOC100191713 

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Top 50 coexpressed genes to 100305496 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100305496 (gma-u.5 coexpression data)

CoexMap"100305496"


gmaLOC100305496 | Entrez gene ID : 100305496      
Species gma mtr ppo ath vvi sly osa zma cre ghi cit hvu bdi sot bra sbi tae nta bna
Paralog 4 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0009507 [list] [network] chloroplast  (1168 genes)  IEA  
GO MF
Protein NP_001236218.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  mito 1  (predict for NP_001236218.2)
Subcellular
localization
TargetP
chlo 5,  mito 3  (predict for NP_001236218.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100305496

.
gma-r.7
for
100305496

.
gma-m.5
for
100305496

.
gma-u.5
for
100814496

.
mtr-u.5
for
11424575

.
ppo-u.5
for
7479516

.
ath-u.5
for
AT2G41950

.
vvi-u.5
for
100267633

.
sly-u.5
for
101264102

.
osa-u.5
for
4332127

.
zma-u.5
for
100191713

.


Ortholog ID: 10713
Species ath gma gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol AT2G41950 LOC100305496 LOC100814496 LOC101264102 LOC4332127 LOC100191713 LOC103866602 LOC100267633 LOC7479516 LOC11424575 LOC123098146 LOC123092864 LOC123449225 LOC107887214 LOC107922032 LOC125608894 BNAA05G02560D LOC8056841 LOC102594828 LOC102618593 LOC100836190 LOC107781405 LOC107759934
Function* DNA-directed RNA polymerase subunit beta S-adenosylmethionine-dependent methyltransferase superfamily protein uncharacterized LOC100814496 uncharacterized LOC101264102 uncharacterized LOC4332127 uncharacterized LOC100191713 uncharacterized LOC103866602 uncharacterized LOC100267633 uncharacterized LOC7479516 uncharacterized LOC11424575 uncharacterized LOC123098146 uncharacterized LOC123092864 uncharacterized LOC123449225 uncharacterized LOC107887214 uncharacterized LOC107922032 uncharacterized LOC125608894 uncharacterized BNAA05G02560D uncharacterized LOC8056841 uncharacterized LOC102594828 uncharacterized LOC102618593 uncharacterized LOC100836190 uncharacterized LOC107781405 uncharacterized LOC107759934
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00053 Ascorbate and aldarate metabolism 2
gma00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 3
zma00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 2
bra04141 Protein processing in endoplasmic reticulum 2
bra04144 Endocytosis 2
bra03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01230 Biosynthesis of amino acids 3
hvu03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna01240 Biosynthesis of cofactors 11
bna00240 Pyrimidine metabolism 9
bna01232 Nucleotide metabolism 9
bna00230 Purine metabolism 4
bna04016 MAPK signaling pathway - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna01240 Biosynthesis of cofactors 11
bna00240 Pyrimidine metabolism 8
bna01232 Nucleotide metabolism 8
bna00230 Purine metabolism 4
bna04016 MAPK signaling pathway - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 4
sot00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 2
cit04141 Protein processing in endoplasmic reticulum 2
cit04144 Endocytosis 2
cit03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03060 Protein export 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 818795 100305496 100814496 101264102 4332127 100191713 103866602 100267633 7479516 11424575 123098146 123092864 123449225 107887214 107922032 125608894 106450641 8056841 102594828 102618593 100836190 107781405 107759934
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