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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100305966   uncharacterized LOC100305966 
 gma-r.7   100305966   uncharacterized LOC100305966 
 gma-m.5   100305966   uncharacterized LOC100305966 
 gma-u.5   100499731   uncharacterized LOC100499731 
 mtr-u.5   11413473   protein CURVATURE THYLAKOID 1D, chloroplastic 
 ppo-u.5   7476431   protein CURVATURE THYLAKOID 1D, chloroplastic 
 ath-u.5   AT4G38100   CURVATURE THYLAKOID 1D-like protein 
 vvi-u.5   100261101   protein CURVATURE THYLAKOID 1D, chloroplastic 
 osa-u.5   4347312   protein CURVATURE THYLAKOID 1D, chloroplastic 
 zma-u.5   100286365   threonine endopeptidase 

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Top 50 coexpressed genes to 100305966 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100305966 (gma-u.5 coexpression data)

CoexMap"100305966"


gmaLOC100305966 | Entrez gene ID : 100305966      
Species gma mtr ppo ath vvi osa zma cre ghi cit hvu sly bdi bra sot sbi tae nta bna
Paralog 4 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0009535 [list] [network] chloroplast thylakoid membrane  (205 genes)  IEA  
GO:0009579 [list] [network] thylakoid  (327 genes)  IEA  
GO MF
Protein NP_001235620.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  cyto 1,  mito 1  (predict for NP_001235620.1)
Subcellular
localization
TargetP
chlo 9  (predict for NP_001235620.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100305966

.
gma-r.7
for
100305966

.
gma-m.5
for
100305966

.
gma-u.5
for
100499731

.
mtr-u.5
for
11413473

.
ppo-u.5
for
7476431

.
ath-u.5
for
AT4G38100

.
vvi-u.5
for
100261101

.
osa-u.5
for
4347312

.
zma-u.5
for
100286365

.


Ortholog ID: 10263
Species ath gma gma osa zma vvi ppo mtr tae tae hvu ghi bna bna sbi cit bdi nta nta
Symbol AT4G38100 LOC100499731 LOC100305966 LOC4347312 LOC100286365 LOC100261101 LOC7476431 LOC11413473 LOC123104032 LOC123112263 LOC123398935 LOC107914359 LOC106361380 LOC106388888 LOC8063724 LOC102631289 LOC100828540 LOC107792017 LOC107811801
Function* CURVATURE THYLAKOID 1D-like protein uncharacterized LOC100499731 uncharacterized LOC100305966 protein CURVATURE THYLAKOID 1D, chloroplastic threonine endopeptidase protein CURVATURE THYLAKOID 1D, chloroplastic protein CURVATURE THYLAKOID 1D, chloroplastic protein CURVATURE THYLAKOID 1D, chloroplastic protein CURVATURE THYLAKOID 1D, chloroplastic uncharacterized LOC123112263 protein CURVATURE THYLAKOID 1D, chloroplastic-like protein CURVATURE THYLAKOID 1D, chloroplastic protein CURVATURE THYLAKOID 1D, chloroplastic protein CURVATURE THYLAKOID 1D, chloroplastic-like protein CURVATURE THYLAKOID 1D, chloroplastic protein CURVATURE THYLAKOID 1D, chloroplastic protein CURVATURE THYLAKOID 1D, chloroplastic protein CURVATURE THYLAKOID 1D, chloroplastic uncharacterized LOC107811801
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 4
ath03020 RNA polymerase 2
ath03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04141 Protein processing in endoplasmic reticulum 5
gma04626 Plant-pathogen interaction 3
gma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 4
osa03040 Spliceosome 3
osa03018 RNA degradation 2
osa01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 4
zma03010 Ribosome 4
zma03018 RNA degradation 2
zma03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 5
vvi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 14
ppo00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 6
tae04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 4
hvu00230 Purine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 12
ghi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 5
bna04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 5
bna04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 4
cit01230 Biosynthesis of amino acids 2
cit00770 Pantothenate and CoA biosynthesis 2
cit01240 Biosynthesis of cofactors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 829966 100499731 100305966 4347312 100286365 100261101 7476431 11413473 123104032 123112263 123398935 107914359 106361380 106388888 8063724 102631289 100828540 107792017 107811801
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