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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100306357   40S ribosomal protein S28 
 gma-r.7   100306357   40S ribosomal protein S28 
 gma-m.5   100306357   40S ribosomal protein S28 
 gma-u.5   100818200   40S ribosomal protein S28 
 gma-u.5   100788626   40S ribosomal protein S28 
 gma-u.5   100790570   40S ribosomal protein S28 
 mtr-u.5   11441897   40S ribosomal protein S28-1 
 mtr-u.5   11414922   40S ribosomal protein S28-1 
 mtr-u.5   11412510   40S ribosomal protein S28 
 ppo-u.5   7486865   40S ribosomal protein S28-2 
 ppo-u.5   7488050   40S ribosomal protein S28-2 
 ppo-u.5   7491591   40S ribosomal protein S28-2 
 ath-u.5   AT3G10090   Nucleic acid-binding, OB-fold-like protein 
 ath-u.5   AT5G03850   Nucleic acid-binding, OB-fold-like protein 
 ath-u.5   RPS28   ribosomal protein S28 
 sly-u.5   101248825   small ribosomal subunit protein eS28 
 sly-u.5   101260729   small ribosomal subunit protein eS28-like 
 sly-u.5   101258605   small ribosomal subunit protein eS28 
 osa-u.5   4348607   small ribosomal subunit protein eS28 
 osa-u.5   4331742   small ribosomal subunit protein eS28 
 zma-u.5   100281083   40S ribosomal protein S28 
 zma-u.5   100280891   40S ribosomal protein S28 
 zma-u.5   100280715   40S ribosomal protein S28 

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Top 50 coexpressed genes to 100306357 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100306357 (gma-u.5 coexpression data)

CoexMap"100306357"


gmaLOC100306357 | Entrez gene ID : 100306357      
Species gma mtr ppo ath sly osa zma sbi nta bra cre vvi cit hvu bdi sot tae bna ghi
Paralog 6 3 3 3 3 2 3 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG gmx03010 [list] [network] Ribosome (1072 genes)
GO BP
GO:0000028 [list] [network] ribosomal small subunit assembly  (43 genes)  IEA  
GO:0030490 [list] [network] maturation of SSU-rRNA  (90 genes)  IEA  
GO:0006412 [list] [network] translation  (852 genes)  IEA  
GO CC
GO:0022627 [list] [network] cytosolic small ribosomal subunit  (138 genes)  IEA  
GO:0005840 [list] [network] ribosome  (633 genes)  IEA  
GO MF
GO:0003735 [list] [network] structural constituent of ribosome  (610 genes)  IEA  
Protein NP_001348006.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  mito 3,  chlo 1,  nucl 1,  cyto_mito 1  (predict for NP_001348006.1)
Subcellular
localization
TargetP
other 4,  mito 4  (predict for NP_001348006.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100306357

.
gma-r.7
for
100306357

.
gma-m.5
for
100306357

.
gma-u.5
for
100818200

.
gma-u.5
for
100788626

.
gma-u.5
for
100790570

.
mtr-u.5
for
11441897

.
mtr-u.5
for
11414922

.
mtr-u.5
for
11412510

.
ppo-u.5
for
7486865

.
ppo-u.5
for
7488050

.
ppo-u.5
for
7491591

.
ath-u.5
for
AT3G10090

.
ath-u.5
for
AT5G03850

.
ath-u.5
for
RPS28

.
sly-u.5
for
101248825

.
sly-u.5
for
101260729

.
sly-u.5
for
101258605

.
osa-u.5
for
4348607

.
osa-u.5
for
4331742

.
zma-u.5
for
100281083

.
zma-u.5
for
100280891

.
zma-u.5
for
100280715

.


Ortholog ID: 2404
Species ath ath gma gma sly sly osa osa zma zma bra ppo ppo mtr mtr tae tae hvu hvu ghi ghi bna cre sbi sbi sot sot cit bdi bdi
Symbol RPS28 AT3G10090 LOC100818200 LOC100790570 LOC101248825 LOC101258605 LOC4348607 LOC4331742 LOC100280891 LOC100280715 LOC103850516 LOC7491591 LOC7488050 LOC11412510 LOC11414922 LOC123081010 LOC123083827 LOC123445707 LOC123445709 LOC107891219 LOC107889469 LOC106433845 CHLRE_12g510450v5 LOC110431762 LOC8082135 LOC102603576 LOC102583160 LOC102622872 LOC100831273 LOC104584494
Function* ribosomal protein S28 Nucleic acid-binding, OB-fold-like protein 40S ribosomal protein S28 40S ribosomal protein S28 small ribosomal subunit protein eS28 small ribosomal subunit protein eS28 small ribosomal subunit protein eS28 small ribosomal subunit protein eS28 40S ribosomal protein S28 40S ribosomal protein S28 40S ribosomal protein S28-2 40S ribosomal protein S28-2 40S ribosomal protein S28-2 40S ribosomal protein S28 40S ribosomal protein S28-1 40S ribosomal protein S28 uncharacterized LOC123083827 40S ribosomal protein S28 40S ribosomal protein S28 40S ribosomal protein S28 40S ribosomal protein S28 40S ribosomal protein S28-1 ribosomal protein S28 40S ribosomal protein S28 40S ribosomal protein S28 40S ribosomal protein S28-like 40S ribosomal protein S28 40S ribosomal protein S28 40S ribosomal protein S28 40S ribosomal protein S28
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 16
zma03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 10
ppo03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 10
mtr04141 Protein processing in endoplasmic reticulum 3
mtr03040 Spliceosome 2
mtr04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 20
hvu04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 7
ghi03015 mRNA surveillance pathway 2
ghi00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 10
sbi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 16
sot04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 16
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 836535 820170 100818200 100790570 101248825 101258605 4348607 4331742 100280891 100280715 103850516 7491591 7488050 11412510 11414922 123081010 123083827 123445707 123445709 107891219 107889469 106433845 5716568 110431762 8082135 102603576 102583160 102622872 100831273 104584494
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