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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100306583   uncharacterized LOC100306583 
 gma-r.7   100306583   uncharacterized LOC100306583 
 gma-m.5   100306583   uncharacterized LOC100306583 
 gma-u.5   100499885   uncharacterized LOC100499885 
 mtr-u.5   25486618   polyubiquitin 9 
 ppo-u.5   7485260   uncharacterized LOC7485260 
 ath-u.5   AT5G57860   Ubiquitin-like superfamily protein 
 bra-r.6   103856726   uncharacterized LOC103856726 
 bra-r.6   103851683   uncharacterized LOC103851683 
 vvi-u.5   100244093   polyubiquitin 9 
 ghi-r.1   107909190   uncharacterized LOC107909190 
 ghi-r.1   107928403   uncharacterized LOC107928403 
 bna-r.1   106436801   uncharacterized LOC106436801 
 bna-r.1   106426089   uncharacterized LOC106426089 
 bna-r.1   106417560   uncharacterized LOC106417560 
 cit-r.1   102618508   uncharacterized LOC102618508 
 sly-u.5   101253687   uncharacterized LOC101253687 
 sot-r.1   102586920   uncharacterized LOC102586920 
 nta-r.1   107828643   uncharacterized LOC107828643 
 nta-r.1   107810311   uncharacterized LOC107810311 
 nta-r.1   107807600   uncharacterized LOC107807600 
 osa-u.5   4332905   uncharacterized LOC4332905 
 zma-u.5   100285884   uncharacterized LOC100285884 
 tae-r.2   123187747   ubiquitin 
 tae-r.2   123043996   ubiquitin 
 hvu-r.1   123425032   ubiquitin-like 
 sbi-r.1   8084580   uncharacterized LOC8084580 
 bdi-r.1   100839867   uncharacterized LOC100839867 
 cre-r.1   CHLRE_12g554750v5   uncharacterized protein 

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Top 50 coexpressed genes to 100306583 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100306583 (gma-u.5 coexpression data)

CoexMap"100306583"


gmaLOC100306583 | Entrez gene ID : 100306583      
Species gma mtr ppo ath bra vvi ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 1 1 1 2 1 2 3 1 1 1 3 1 1 2 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG gmx04120 [list] [network] Ubiquitin mediated proteolysis (237 genes)
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (7243 genes)  IEA  
Protein NP_001237084.1 [sequence] [blastp]
XP_006580930.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto_nucl 4,  nucl 3,  chlo 3,  cyto 2,  mito 1,  plas 1,  mito_plas 1  (predict for NP_001237084.1)
cyto_nucl 4,  nucl 3,  chlo 3,  cyto 2,  mito 1,  plas 1,  mito_plas 1  (predict for XP_006580930.1)
Subcellular
localization
TargetP
other 6,  mito 5  (predict for NP_001237084.1)
other 6,  mito 5  (predict for XP_006580930.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100306583
gma-r.7
for
100306583
gma-m.5
for
100306583
gma-u.5
for
100499885
mtr-u.5
for
25486618
ppo-u.5
for
7485260
ath-u.5
for
AT5G57860
bra-r.6
for
103856726
bra-r.6
for
103851683
vvi-u.5
for
100244093
ghi-r.1
for
107909190
ghi-r.1
for
107928403
bna-r.1
for
106436801
bna-r.1
for
106426089
bna-r.1
for
106417560
cit-r.1
for
102618508
sly-u.5
for
101253687
sot-r.1
for
102586920
nta-r.1
for
107828643
nta-r.1
for
107810311
nta-r.1
for
107807600
osa-u.5
for
4332905
zma-u.5
for
100285884
tae-r.2
for
123187747
tae-r.2
for
123043996
hvu-r.1
for
123425032
sbi-r.1
for
8084580
bdi-r.1
for
100839867
cre-r.1
for
CHLRE_12g554750v5


Ortholog ID: 7381
Species gma gma mtr ppo ath bra bra vvi ghi ghi bna bna bna cit sly sot nta nta nta osa zma tae tae hvu sbi bdi cre
Symbol LOC100306583 LOC100499885 LOC25486618 LOC7485260 AT5G57860 LOC103856726 LOC103851683 LOC100244093 LOC107909190 LOC107928403 LOC106417560 BNAC02G11160D LOC125575307 LOC102618508 LOC101253687 LOC102586920 LOC107810311 LOC107807600 LOC107776317 LOC4332905 LOC100285884 LOC123187747 LOC123043996 LOC123425032 LOC8084580 LOC100839867 CHLRE_12g554750v5
Function* uncharacterized LOC100306583 uncharacterized LOC100499885 polyubiquitin 9 uncharacterized LOC7485260 Ubiquitin-like superfamily protein uncharacterized LOC103856726 uncharacterized LOC103851683 polyubiquitin 9 uncharacterized LOC107909190 uncharacterized LOC107928403 uncharacterized LOC106417560 uncharacterized BNAC02G11160D uncharacterized LOC125575307 uncharacterized LOC102618508 uncharacterized LOC101253687 uncharacterized LOC102586920 uncharacterized LOC107810311 uncharacterized LOC107807600 uncharacterized LOC107776317 uncharacterized LOC4332905 uncharacterized LOC100285884 ubiquitin ubiquitin ubiquitin-like uncharacterized LOC8084580 uncharacterized LOC100839867 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 3
gma04142 Lysosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04130 SNARE interactions in vesicular transport 3
mtr00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00190 Oxidative phosphorylation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 7
ath03020 RNA polymerase 3
ath03420 Nucleotide excision repair 3
ath03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03030 DNA replication 5
bra03420 Nucleotide excision repair 3
bra03430 Mismatch repair 3
bra03440 Homologous recombination 2
bra03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00190 Oxidative phosphorylation 2
vvi03060 Protein export 2
vvi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00900 Terpenoid backbone biosynthesis 2
bna00230 Purine metabolism 2
bna00240 Pyrimidine metabolism 2
bna01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00900 Terpenoid backbone biosynthesis 2
bna00230 Purine metabolism 2
bna00240 Pyrimidine metabolism 2
bna01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03083 Polycomb repressive complex 4
bna04120 Ubiquitin mediated proteolysis 4
bna04141 Protein processing in endoplasmic reticulum 4
bna00900 Terpenoid backbone biosynthesis 2
bna00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03050 Proteasome 4
cit00190 Oxidative phosphorylation 4
cit03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00190 Oxidative phosphorylation 4
sly03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 3
sot03018 RNA degradation 2
sot03020 RNA polymerase 2
sot03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03050 Proteasome 8
nta04120 Ubiquitin mediated proteolysis 2
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03050 Proteasome 12
nta04120 Ubiquitin mediated proteolysis 2
nta00020 Citrate cycle (TCA cycle) 2
nta00270 Cysteine and methionine metabolism 2
nta00566 Sulfoquinovose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03420 Nucleotide excision repair 3
zma04120 Ubiquitin mediated proteolysis 2
zma04141 Protein processing in endoplasmic reticulum 2
zma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 5
tae03008 Ribosome biogenesis in eukaryotes 3
tae03020 RNA polymerase 3
tae03420 Nucleotide excision repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 7
tae03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
hvu01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04120 Ubiquitin mediated proteolysis 4
bdi03040 Spliceosome 2
bdi04136 Autophagy - other 2
bdi03420 Nucleotide excision repair 2
bdi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 5
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100306583 100499885 25486618 7485260 835896 103856726 103851683 100244093 107909190 107928403 106417560 106388563 125575307 102618508 101253687 102586920 107810311 107807600 107776317 4332905 100285884 123187747 123043996 123425032 8084580 100839867 5719721
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