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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5   100382456   uncharacterized LOC100382456 
 zma-r.6   100382456   uncharacterized LOC100382456 
 osa-u.5   4329335   pentatricopeptide repeat-containing protein At3g12770 
 gma-u.5   100812822   pentatricopeptide repeat-containing protein At4g19191, mitochondrial 
 vvi-u.5   104881971   pentatricopeptide repeat-containing protein At4g19191, mitochondrial 
 mtr-u.5   25496618   pentatricopeptide repeat-containing protein DOT4, chloroplastic 

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Top 50 coexpressed genes to 100382456 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100382456 (zma-u.5 coexpression data)

CoexMap"100382456"


zmaLOC100382456 | Entrez gene ID : 100382456      
Species zma osa gma vvi mtr hvu bna sly cit bra ghi ppo sbi bdi ath nta tae cre sot
Paralog 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (350 genes)  IEA  
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1549 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4389 genes)  IEA  
Protein NP_001168668.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  chlo_mito 4,  nucl 2,  mito 1,  nucl_plas 1  (predict for NP_001168668.1)
Subcellular
localization
TargetP
other 3  (predict for NP_001168668.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-u.5
for
100382456
zma-r.6
for
100382456
osa-u.5
for
4329335
gma-u.5
for
100812822
vvi-u.5
for
104881971
mtr-u.5
for
25496618


Ortholog ID: 12768
Species zma osa hvu bdi gma vvi mtr ghi ghi cit
Symbol LOC100382456 LOC4329335 LOC123398623 LOC100834942 LOC100812822 LOC104881971 LOC25496618 LOC107927332 LOC107935563 LOC102630661
Function* uncharacterized LOC100382456 pentatricopeptide repeat-containing protein At3g12770 pentatricopeptide repeat-containing protein At1g11290, chloroplastic-like pentatricopeptide repeat-containing protein At1g11290, chloroplastic pentatricopeptide repeat-containing protein At4g19191, mitochondrial pentatricopeptide repeat-containing protein At4g19191, mitochondrial pentatricopeptide repeat-containing protein DOT4, chloroplastic pentatricopeptide repeat-containing protein At4g21065 pentatricopeptide repeat-containing protein At4g21065 pentatricopeptide repeat-containing protein DOT4, chloroplastic-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 3
osa03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00730 Thiamine metabolism 2
hvu01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03082 ATP-dependent chromatin remodeling 3
gma03083 Polycomb repressive complex 3
gma00052 Galactose metabolism 2
gma00561 Glycerolipid metabolism 2
gma00600 Sphingolipid metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100382456 4329335 123398623 100834942 100812822 104881971 25496618 107927332 107935563 102630661
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