ATTED-II : GeneCoexpression result

Species	Gene	Description
zma-u.5	100383665	uncharacterized LOC100383665
zma-r.6	100383665	uncharacterized LOC100383665
zma-m.5	100383665	uncharacterized LOC100383665
zma-u.5	100191223	Syntaxin 23
zma-u.5	100194315	uncharacterized LOC100194315
osa-u.5	4327713	syntaxin-22
osa-u.5	4330446	syntaxin-22
ath-u.5	SYP23	syntaxin of plants 23
ath-u.5	SYP21	syntaxin of plants 21
ath-u.5	VAM3	Syntaxin/t-SNARE family protein
gma-u.5	547656	syntaxin
gma-u.5	100787141	syntaxin-22
gma-u.5	100796477	syntaxin-22
sly-u.5	101264234	syntaxin-22-like
sly-u.5	101259184	syntaxin-22
sly-u.5	101264438	syntaxin-22
vvi-u.5	100257399	syntaxin-22
vvi-u.5	100254896	syntaxin-22
vvi-u.5	100249411	syntaxin-22
ppo-u.5	7456087	syntaxin-22
ppo-u.5	7462007	syntaxin-22
ppo-u.5	18094134	syntaxin-22
mtr-u.5	11424830	syntaxin-22
mtr-u.5	11427617	syntaxin-22
mtr-u.5	11443508	syntaxin-22

Annotation

functional annotation

KEGG

GO BP

GO:0048278 [list] [network] vesicle docking	(24 genes)	IEA
GO:0006906 [list] [network] vesicle fusion	(43 genes)	IEA
GO:0006886 [list] [network] intracellular protein transport	(303 genes)	IEA
GO:0016192 [list] [network] vesicle-mediated transport	(509 genes)	IEA

GO CC

GO:0031201 [list] [network] SNARE complex	(44 genes)	IEA
GO:0012505 [list] [network] endomembrane system	(1363 genes)	IEA
GO:0016020 [list] [network] membrane	(3751 genes)	IEA

GO MF

GO:0005484 [list] [network] SNAP receptor activity	(45 genes)	IEA
GO:0000149 [list] [network] SNARE binding	(79 genes)	IEA

Protein

NP_001353759.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto 4, E.R. 1, golg 1, nucl 1, mito 1, plas 1, vacu 1, pero 1, nucl_plas 1, mito_plas 1

(predict for NP_001353759.1)

Subcellular
localization
TargetP

other 6

(predict for NP_001353759.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	zma-u.5 for 100383665	zma-r.6 for 100383665	zma-m.5 for 100383665	zma-u.5 for 100191223	zma-u.5 for 100194315	osa-u.5 for 4327713	osa-u.5 for 4330446	ath-u.5 for SYP23	ath-u.5 for SYP21	ath-u.5 for VAM3	gma-u.5 for 547656	gma-u.5 for 100787141	gma-u.5 for 100796477	sly-u.5 for 101264234	sly-u.5 for 101259184	sly-u.5 for 101264438	vvi-u.5 for 100257399	vvi-u.5 for 100254896	vvi-u.5 for 100249411	ppo-u.5 for 7456087	ppo-u.5 for 7462007	ppo-u.5 for 18094134	mtr-u.5 for 11424830	mtr-u.5 for 11427617	mtr-u.5 for 11443508

Ortholog

Ortholog ID: 1021

Species

zma

sbi

osa

tae

hvu

bdi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

SYP21

SYP23

Function^*

uncharacterized LOC100194315

uncharacterized LOC100383665

syntaxin-22

syntaxin-22-like

syntaxin-22

syntaxin of plants 21

syntaxin of plants 23

syntaxin-22

syntaxin

syntaxin-22

syntaxin-22-like

syntaxin-21

syntaxin-22

syntaxin-21

syntaxin-22

syntaxin-22-like

syntaxin-22

syntaxin-22-like

uncharacterized protein

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04120	Ubiquitin mediated proteolysis	2
zma04148	Efferocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00620	Pyruvate metabolism	2
sbi00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04144	Endocytosis	3
tae04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04075	Plant hormone signal transduction	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04144	Endocytosis	5
bdi04145	Phagosome	4
bdi04148	Efferocytosis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03015	mRNA surveillance pathway	6
gma04382	Cornified envelope formation	6
gma04136	Autophagy - other	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04141	Protein processing in endoplasmic reticulum	3
gma04814	Motor proteins	2
gma03083	Polycomb repressive complex	2
gma04120	Ubiquitin mediated proteolysis	2
gma04130	SNARE interactions in vesicular transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04144	Endocytosis	3
ppo04142	Lysosome	2
ppo00230	Purine metabolism	2
ppo01232	Nucleotide metabolism	2
ppo00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04144	Endocytosis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04075	Plant hormone signal transduction	2
mtr00260	Glycine, serine and threonine metabolism	2
mtr00350	Tyrosine metabolism	2
mtr00360	Phenylalanine metabolism	2
mtr00410	beta-Alanine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04144	Endocytosis	4
mtr03250	Viral life cycle - HIV-1	2
mtr03272	Virion - Hepatitis viruses	2
mtr04145	Phagosome	2
mtr04148	Efferocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04141	Protein processing in endoplasmic reticulum	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03040	Spliceosome	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03040	Spliceosome	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03013	Nucleocytoplasmic transport	3
cit03022	Basal transcription factors	2
cit04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04144	Endocytosis	4
nta04130	SNARE interactions in vesicular transport	3
nta03013	Nucleocytoplasmic transport	2
nta03015	mRNA surveillance pathway	2
nta03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03013	Nucleocytoplasmic transport	2
nta03015	mRNA surveillance pathway	2
nta03040	Spliceosome	2
nta03250	Viral life cycle - HIV-1	2
nta03272	Virion - Hepatitis viruses	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre04144	Endocytosis	5
cre03250	Viral life cycle - HIV-1	2
cre03272	Virion - Hepatitis viruses	2

Expression

Expression pattern

Entrez Gene ID^*

100194315

100383665

8085806

8073164

4327713

123128113

123137903

123402163

123443398

100845480

831546

827494

100796477

547656

101264438

101264234

103856218

100249411

100257399

18094134

7456087

11427617

11443508

107946763

107938586

106354442

106400025

102594331

102584384

102625557

102610222

107796587

107824262

66051974

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 100383665 (zma-u.5 coexpression data)

Top 50 enrichment test to 100383665 (zma-u.5 coexpression data)


Species	zma	osa	ath	gma	sly	vvi	ppo	mtr	bdi	hvu	bra	cit	bna	sbi	ghi	sot	nta	cre	tae
Paralog	5	2	3	3	3	3	3	3	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100383665 (zma-u.5 coexpression data)

Top 50 enrichment test to 100383665 (zma-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**