ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
zma-u.5	100383712	Galactose mutarotase-like superfamily protein
zma-r.6	100383712	Galactose mutarotase-like superfamily protein
zma-u.5	103646366	galactose mutarotase
zma-u.5	100191144	Galactose mutarotase-like superfamily protein
zma-u.5	100383094	Galactose mutarotase-like superfamily protein
sbi-r.1	8073425	aldose 1-epimerase
osa-u.5	4329753	uncharacterized LOC4329753
osa-u.5	4336039	uncharacterized LOC4336039
tae-r.2	123049465	galactose mutarotase
tae-r.2	123049464	galactose mutarotase-like
hvu-r.1	123426898	galactose mutarotase-like
hvu-r.1	123426899	galactose mutarotase-like
bdi-r.1	100844522	aldose 1-epimerase
bdi-r.1	100844223	aldose 1-epimerase
ath-u.5	AT3G47800	Galactose mutarotase-like superfamily protein
gma-u.5	100781853	aldose 1-epimerase-like
gma-u.5	100798975	galactose mutarotase
gma-u.5	100803092	aldose 1-epimerase-like
sly-u.5	109119603	aldose 1-epimerase superfamily protein
sly-u.5	101249166	uncharacterized LOC101249166
bra-r.6	103873204	aldose 1-epimerase
vvi-u.5	100256955	uncharacterized LOC100256955
vvi-u.5	100245569	uncharacterized LOC100245569
vvi-u.5	100256158	uncharacterized LOC100256158
ppo-u.5	7495960	uncharacterized LOC7495960
ppo-u.5	7472563	uncharacterized LOC7472563
mtr-u.5	25495289	galactose mutarotase
mtr-u.5	25495288	galactose mutarotase
mtr-u.5	11427981	galactose mutarotase
ghi-r.1	107961688	galactose mutarotase
bna-r.1	125575209	galactose mutarotase
bna-r.1	106347601	galactose mutarotase
sot-r.1	102585025	aldose 1-epimerase
sot-r.1	102590141	aldose 1-epimerase-like
sot-r.1	102590807	aldose 1-epimerase-like
cit-r.1	102625637	uncharacterized LOC102625637
cit-r.1	102623935	uncharacterized LOC102623935
cit-r.1	102625926	uncharacterized LOC102625926
nta-r.1	107787175	aldose 1-epimerase-like
nta-r.1	107788085	uncharacterized LOC107788085
nta-r.1	107788423	aldose 1-epimerase-like

Top 50 coexpressed genes to 100383712 (zma-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 100383712 (zma-u.5 coexpression data)

CoexMap"100383712"

[Cytoscape]

Annotation

functional annotation

KEGG

zma00010 [list] [network] Glycolysis / Gluconeogenesis (166 genes)

zma00052 [list] [network] Galactose metabolism (72 genes)

GO BP

GO:0033499 [list] [network] galactose catabolic process via UDP-galactose, Leloir pathway	(8 genes)	IEA
GO:0006006 [list] [network] glucose metabolic process	(62 genes)	IEA

GO CC

GO MF

GO:0004034 [list] [network] aldose 1-epimerase activity	(8 genes)	IEA
GO:0030246 [list] [network] carbohydrate binding	(241 genes)	IEA

Protein

NP_001169820.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 6, chlo_mito 4, E.R. 1, cyto 1, vacu 1, E.R._plas 1

(predict for NP_001169820.1)

Subcellular
localization
TargetP

scret 6, mito 4

(predict for NP_001169820.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	zma-u.5 for 100383712	zma-r.6 for 100383712	zma-u.5 for 103646366	zma-u.5 for 100191144	zma-u.5 for 100383094	sbi-r.1 for 8073425	osa-u.5 for 4329753	osa-u.5 for 4336039	tae-r.2 for 123049465	tae-r.2 for 123049464	hvu-r.1 for 123426898	hvu-r.1 for 123426899	bdi-r.1 for 100844522	bdi-r.1 for 100844223	ath-u.5 for AT3G47800	gma-u.5 for 100781853	gma-u.5 for 100798975	gma-u.5 for 100803092	sly-u.5 for 109119603	sly-u.5 for 101249166	bra-r.6 for 103873204	vvi-u.5 for 100256955	vvi-u.5 for 100245569	vvi-u.5 for 100256158	ppo-u.5 for 7495960	ppo-u.5 for 7472563	mtr-u.5 for 25495289	mtr-u.5 for 25495288	mtr-u.5 for 11427981	ghi-r.1 for 107961688	bna-r.1 for 125575209	bna-r.1 for 106347601	sot-r.1 for 102585025	sot-r.1 for 102590141	sot-r.1 for 102590807	cit-r.1 for 102625637	cit-r.1 for 102623935	cit-r.1 for 102625926	nta-r.1 for 107787175	nta-r.1 for 107788085	nta-r.1 for 107788423

Ortholog

Ortholog ID: 751

Species

zma

sbi

osa

tae

hvu

bdi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

Symbol

Function^*

galactose mutarotase

Galactose mutarotase-like superfamily protein

aldose 1-epimerase

uncharacterized LOC4329753

uncharacterized LOC4336039

uncharacterized LOC4336037

galactose mutarotase

galactose mutarotase-like

aldose 1-epimerase

Galactose mutarotase-like superfamily protein

aldose 1-epimerase-like

aldose 1-epimerase superfamily protein

uncharacterized LOC101249166

aldose 1-epimerase

uncharacterized LOC100256955

uncharacterized LOC100245569

uncharacterized LOC100256158

uncharacterized LOC7495960

galactose mutarotase

aldose 1-epimerase

aldose 1-epimerase-like

uncharacterized LOC102625637

uncharacterized LOC102623935

uncharacterized LOC102625926

uncharacterized LOC107788085

uncharacterized LOC107806061

uncharacterized LOC142179590

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00052	Galactose metabolism	3
zma00010	Glycolysis / Gluconeogenesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00040	Pentose and glucuronate interconversions	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04016	MAPK signaling pathway - plant	2
sbi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00500	Starch and sucrose metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00052	Galactose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00460	Cyanoamino acid metabolism	6
tae00500	Starch and sucrose metabolism	6
tae00999	Biosynthesis of various plant secondary metabolites	6
tae00520	Amino sugar and nucleotide sugar metabolism	3
tae00010	Glycolysis / Gluconeogenesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu01200	Carbon metabolism	2
hvu00010	Glycolysis / Gluconeogenesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04075	Plant hormone signal transduction	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00710	Carbon fixation by Calvin cycle	5
gma01200	Carbon metabolism	5
gma00010	Glycolysis / Gluconeogenesis	5
gma01230	Biosynthesis of amino acids	3
gma00020	Citrate cycle (TCA cycle)	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00010	Glycolysis / Gluconeogenesis	3
gma00052	Galactose metabolism	2
gma00040	Pentose and glucuronate interconversions	2
gma00591	Linoleic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00052	Galactose metabolism	3
sly00100	Steroid biosynthesis	3
sly00010	Glycolysis / Gluconeogenesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03010	Ribosome	2
sly00280	Valine, leucine and isoleucine degradation	2
sly01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00910	Nitrogen metabolism	3
vvi01310	Nitrogen cycle	2
vvi00010	Glycolysis / Gluconeogenesis	2
vvi00052	Galactose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00010	Glycolysis / Gluconeogenesis	2
vvi00052	Galactose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00010	Glycolysis / Gluconeogenesis	2
ppo00710	Carbon fixation by Calvin cycle	2
ppo01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr01230	Biosynthesis of amino acids	2
mtr00010	Glycolysis / Gluconeogenesis	2
mtr00052	Galactose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04712	Circadian rhythm - plant	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00280	Valine, leucine and isoleucine degradation	4
mtr00010	Glycolysis / Gluconeogenesis	3
mtr01200	Carbon metabolism	3
mtr00910	Nitrogen metabolism	3
mtr00561	Glycerolipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00010	Glycolysis / Gluconeogenesis	2
ghi00052	Galactose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00010	Glycolysis / Gluconeogenesis	2
ghi00052	Galactose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00010	Glycolysis / Gluconeogenesis	2
bna00052	Galactose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00010	Glycolysis / Gluconeogenesis	2
bna00052	Galactose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00190	Oxidative phosphorylation	4
sot00010	Glycolysis / Gluconeogenesis	2
sot00052	Galactose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00010	Glycolysis / Gluconeogenesis	5
sot01200	Carbon metabolism	4
sot01230	Biosynthesis of amino acids	3
sot00620	Pyruvate metabolism	3
sot00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot01250	Biosynthesis of nucleotide sugars	5
sot00520	Amino sugar and nucleotide sugar metabolism	4
sot00541	Biosynthesis of various nucleotide sugars	3
sot00040	Pentose and glucuronate interconversions	2
sot00053	Ascorbate and aldarate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00010	Glycolysis / Gluconeogenesis	3
cit00620	Pyruvate metabolism	2
cit01200	Carbon metabolism	2
cit00100	Steroid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00520	Amino sugar and nucleotide sugar metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00940	Phenylpropanoid biosynthesis	4
cit00052	Galactose metabolism	2
cit00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00010	Glycolysis / Gluconeogenesis	4
nta00052	Galactose metabolism	4
nta00500	Starch and sucrose metabolism	2
nta00240	Pyrimidine metabolism	2
nta01232	Nucleotide metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00010	Glycolysis / Gluconeogenesis	6
nta00052	Galactose metabolism	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00010	Glycolysis / Gluconeogenesis	6
nta00052	Galactose metabolism	6
nta00940	Phenylpropanoid biosynthesis	2

Expression

Expression pattern

Entrez Gene ID^*

103646366

100383094

100283171

8070546

4329753

4336039

4336037

123045649

123426898

123426899

123426900

100844223

100837503

823934

100781853

100803092

109119603

101249166

103873204

100256955

100245569

100256158

7495960

25495288

11427981

11440207

107961688

107886858

125575209

106347601

102585025

102590141

102590807

102625637

102623935

102625926

107788085

107806061

142179590

The preparation time of this page was 0.1 [sec].


Species	zma	sbi	osa	tae	hvu	bdi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	5	1	2	2	2	2	1	3	2	1	3	2	3	1	2	3	3	3	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100383712 (zma-u.5 coexpression data)

Top 50 enrichment test to 100383712 (zma-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**