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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100499988   uncharacterized LOC100499988 
 gma-r.7   100499988   uncharacterized LOC100499988 
 gma-m.5   100499988   uncharacterized LOC100499988 
 gma-u.5   100499663   uncharacterized LOC100499663 
 gma-u.5   100305989   uncharacterized LOC100305989 
 mtr-u.5   11433615   trafficking protein particle complex subunit 4 
 mtr-u.5   11415750   trafficking protein particle complex subunit 4 
 ppo-u.5   7454872   uncharacterized LOC7454872 
 ath-u.5   AT5G02280   SNARE-like superfamily protein 
 bra-r.6   103855458   trafficking protein particle complex subunit 4 
 bra-r.6   103847462   trafficking protein particle complex subunit 4 
 vvi-u.5   100264962   uncharacterized LOC100264962 
 ghi-r.1   107891057   trafficking protein particle complex subunit 4 
 ghi-r.1   107889687   trafficking protein particle complex subunit 4 
 ghi-r.1   107913588   trafficking protein particle complex subunit 4 
 bna-r.1   106448906   trafficking protein particle complex subunit 4-like 
 bna-r.1   106433549   trafficking protein particle complex subunit 4-like 
 bna-r.1   106429079   trafficking protein particle complex subunit 4 
 cit-r.1   102619996   uncharacterized LOC102619996 
 sly-u.5   101249127   uncharacterized LOC101249127 
 sot-r.1   102589638   trafficking protein particle complex subunit 4 
 nta-r.1   107789985   uncharacterized LOC107789985 
 nta-r.1   107771101   uncharacterized LOC107771101 
 nta-r.1   107823660   uncharacterized LOC107823660 
 osa-u.5   4343141   uncharacterized LOC4343141 
 osa-u.5   9266914   uncharacterized LOC9266914 
 zma-u.5   100283133   uncharacterized LOC100283133 
 tae-r.2   123123563   trafficking protein particle complex subunit 4 
 tae-r.2   123105736   trafficking protein particle complex subunit 4 
 hvu-r.1   123453124   trafficking protein particle complex subunit 4 
 sbi-r.1   8068795   trafficking protein particle complex subunit 4 
 bdi-r.1   100825236   trafficking protein particle complex subunit 4 
 bdi-r.1   100821740   trafficking protein particle complex subunit 4 
 cre-r.1   CHLRE_02g077500v5   uncharacterized protein 

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Top 50 coexpressed genes to 100499988 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100499988 (gma-u.5 coexpression data)

CoexMap"100499988"


gmaLOC100499988 | Entrez gene ID : 100499988      
Species gma mtr ppo ath bra vvi ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre
Paralog 5 2 1 1 2 1 3 3 1 1 1 3 2 1 2 1 1 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006888 [list] [network] endoplasmic reticulum to Golgi vesicle-mediated transport  (170 genes)  IEA  
GO CC
GO:0030008 [list] [network] TRAPP complex  (22 genes)  IEA  
GO MF
Protein NP_001235254.1 [sequence] [blastp]
XP_006586631.1 [sequence] [blastp]
XP_006586632.1 [sequence] [blastp]
XP_006586633.1 [sequence] [blastp]
Subcellular
localization
wolf
extr 5,  cyto 2,  chlo 1,  nucl 1  (predict for NP_001235254.1)
extr 5,  cyto 2,  chlo 1,  nucl 1  (predict for XP_006586631.1)
extr 5,  cyto 2,  chlo 1,  nucl 1  (predict for XP_006586632.1)
extr 5,  cyto 2,  chlo 1,  nucl 1  (predict for XP_006586633.1)
Subcellular
localization
TargetP
other 5  (predict for NP_001235254.1)
other 5  (predict for XP_006586631.1)
other 5  (predict for XP_006586632.1)
other 5  (predict for XP_006586633.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100499988
gma-r.7
for
100499988
gma-m.5
for
100499988
gma-u.5
for
100499663
gma-u.5
for
100305989
mtr-u.5
for
11433615
mtr-u.5
for
11415750
ppo-u.5
for
7454872
ath-u.5
for
AT5G02280
bra-r.6
for
103855458
bra-r.6
for
103847462
vvi-u.5
for
100264962
ghi-r.1
for
107891057
ghi-r.1
for
107889687
ghi-r.1
for
107913588
bna-r.1
for
106448906
bna-r.1
for
106433549
bna-r.1
for
106429079
cit-r.1
for
102619996
sly-u.5
for
101249127
sot-r.1
for
102589638
nta-r.1
for
107789985
nta-r.1
for
107771101
nta-r.1
for
107823660
osa-u.5
for
4343141
osa-u.5
for
9266914
zma-u.5
for
100283133
tae-r.2
for
123123563
tae-r.2
for
123105736
hvu-r.1
for
123453124
sbi-r.1
for
8068795
bdi-r.1
for
100825236
bdi-r.1
for
100821740
cre-r.1
for
CHLRE_02g077500v5


Ortholog ID: 6085
Species gma gma gma mtr mtr ppo ath bra bra vvi ghi ghi ghi bna bna bna cit sly sot nta nta nta osa osa zma tae tae hvu sbi bdi bdi cre
Symbol LOC100499988 LOC100499663 LOC100305989 LOC11433615 LOC11415750 LOC7454872 AT5G02280 LOC103855458 LOC103847462 LOC100264962 LOC107891057 LOC107889687 LOC107944007 LOC106448906 LOC106433549 LOC106429079 LOC102619996 LOC101249127 LOC102589638 LOC107789985 LOC107771101 LOC107823660 LOC4343141 LOC9266914 LOC100283133 LOC123123563 LOC123105736 LOC123453124 LOC8068795 LOC100825236 LOC100821740 CHLRE_02g077500v5
Function* uncharacterized LOC100499988 uncharacterized LOC100499663 uncharacterized LOC100305989 trafficking protein particle complex subunit 4 trafficking protein particle complex subunit 4 uncharacterized LOC7454872 SNARE-like superfamily protein trafficking protein particle complex subunit 4 trafficking protein particle complex subunit 4 uncharacterized LOC100264962 trafficking protein particle complex subunit 4 trafficking protein particle complex subunit 4 trafficking protein particle complex subunit 4 trafficking protein particle complex subunit 4-like trafficking protein particle complex subunit 4-like trafficking protein particle complex subunit 4 uncharacterized LOC102619996 uncharacterized LOC101249127 trafficking protein particle complex subunit 4 uncharacterized LOC107789985 uncharacterized LOC107771101 uncharacterized LOC107823660 uncharacterized LOC4343141 uncharacterized LOC9266914 uncharacterized LOC100283133 trafficking protein particle complex subunit 4 trafficking protein particle complex subunit 4 trafficking protein particle complex subunit 4 trafficking protein particle complex subunit 4 trafficking protein particle complex subunit 4 trafficking protein particle complex subunit 4 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00190 Oxidative phosphorylation 5
gma04145 Phagosome 4
gma04142 Lysosome 3
gma04141 Protein processing in endoplasmic reticulum 2
gma04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00190 Oxidative phosphorylation 8
gma04145 Phagosome 5
gma04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00190 Oxidative phosphorylation 5
gma04145 Phagosome 4
gma04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00190 Oxidative phosphorylation 2
mtr04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04141 Protein processing in endoplasmic reticulum 2
mtr04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00510 N-Glycan biosynthesis 2
ppo00513 Various types of N-glycan biosynthesis 2
ppo04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03018 RNA degradation 2
ath00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04144 Endocytosis 2
bra04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04144 Endocytosis 2
vvi04120 Ubiquitin mediated proteolysis 2
vvi04141 Protein processing in endoplasmic reticulum 2
vvi03020 RNA polymerase 2
vvi03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01240 Biosynthesis of cofactors 4
ghi00500 Starch and sucrose metabolism 3
ghi00053 Ascorbate and aldarate metabolism 2
ghi00562 Inositol phosphate metabolism 2
ghi04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00190 Oxidative phosphorylation 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04145 Phagosome 3
cit03060 Protein export 2
cit04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03015 mRNA surveillance pathway 3
sly03013 Nucleocytoplasmic transport 2
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00908 Zeatin biosynthesis 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03083 Polycomb repressive complex 4
nta04120 Ubiquitin mediated proteolysis 4
nta04141 Protein processing in endoplasmic reticulum 4
nta03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04120 Ubiquitin mediated proteolysis 8
nta03083 Polycomb repressive complex 5
nta04141 Protein processing in endoplasmic reticulum 5
nta03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03083 Polycomb repressive complex 4
nta04120 Ubiquitin mediated proteolysis 4
nta04141 Protein processing in endoplasmic reticulum 4
nta03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03050 Proteasome 5
osa04144 Endocytosis 2
osa04016 MAPK signaling pathway - plant 2
osa04070 Phosphatidylinositol signaling system 2
osa04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03050 Proteasome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00190 Oxidative phosphorylation 3
tae03050 Proteasome 3
tae03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00190 Oxidative phosphorylation 3
tae04144 Endocytosis 2
tae00020 Citrate cycle (TCA cycle) 2
tae00640 Propanoate metabolism 2
tae01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03015 mRNA surveillance pathway 2
hvu04382 Cornified envelope formation 2
hvu04141 Protein processing in endoplasmic reticulum 2
hvu04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03050 Proteasome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03060 Protein export 2
bdi04016 MAPK signaling pathway - plant 2
bdi04070 Phosphatidylinositol signaling system 2
bdi04075 Plant hormone signal transduction 2
bdi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04144 Endocytosis 6
bdi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00190 Oxidative phosphorylation 2
cre00510 N-Glycan biosynthesis 2
cre00513 Various types of N-glycan biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100499988 100499663 100305989 11433615 11415750 7454872 831680 103855458 103847462 100264962 107891057 107889687 107944007 106448906 106433549 106429079 102619996 101249127 102589638 107789985 107771101 107823660 4343141 9266914 100283133 123123563 123105736 123453124 8068795 100825236 100821740 5727233
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