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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100500027   uncharacterized LOC100500027 
 gma-r.7   100500027   uncharacterized LOC100500027 
 gma-u.5   100801614   signal recognition particle 19 kDa protein-like 
 mtr-u.5   25499231   signal recognition particle 19 kDa protein 
 ppo-u.5   7462510   signal recognition particle 19 kDa protein 
 ppo-u.5   7493484   signal recognition particle 19 kDa protein 
 ath-u.5   AT1G48160   signal recognition particle 19 kDa protein, putative / SRP19 
 vvi-u.5   100264739   signal recognition particle 19 kDa protein 
 vvi-u.5   100854647   signal recognition particle 19 kDa protein 
 sly-u.5   101248030   signal recognition particle 19 kDa protein 
 osa-u.5   4340957   signal recognition particle 19 kDa protein-like 
 zma-u.5   103645776   signal recognition particle 19 kDa protein 
 zma-u.5   100282410   signal recognition particle 19 kDa protein 

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Top 50 coexpressed genes to 100500027 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100500027 (gma-u.5 coexpression data)

CoexMap"100500027"


gmaLOC100500027 | Entrez gene ID : 100500027      
Species gma mtr ppo ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 3 1 2 1 2 1 1 2 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG gmx03060 [list] [network] Protein export (105 genes)
GO BP
GO:0006617 [list] [network] SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition  (2 genes)  IEA  
GO:0006614 [list] [network] SRP-dependent cotranslational protein targeting to membrane  (38 genes)  IEA  
GO CC
GO:0005786 [list] [network] signal recognition particle, endoplasmic reticulum targeting  (16 genes)  IEA  
GO MF
GO:0008312 [list] [network] 7S RNA binding  (18 genes)  IEA  
Protein NP_001235798.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  extr 4,  nucl 1  (predict for NP_001235798.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001235798.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100500027

.
gma-r.7
for
100500027

.
gma-u.5
for
100801614

.
mtr-u.5
for
25499231

.
ppo-u.5
for
7462510

.
ppo-u.5
for
7493484

.
ath-u.5
for
AT1G48160

.
vvi-u.5
for
100264739

.
vvi-u.5
for
100854647

.
sly-u.5
for
101248030

.
osa-u.5
for
4340957

.
zma-u.5
for
103645776

.
zma-u.5
for
100282410

.


Ortholog ID: 6152
Species ath gma gma sly osa zma zma bra bra vvi vvi ppo ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot sot cit bdi bdi nta nta
Symbol AT1G48160 LOC100500027 LOC100801614 LOC101248030 LOC4340957 LOC100282410 LOC103645776 LOC103868692 LOC103833043 LOC100264739 LOC100854647 LOC7493484 LOC7462510 LOC25499231 LOC123166765 LOC123147737 LOC123410823 LOC121230849 LOC107960275 LOC125577000 LOC106425169 CHLRE_02g095070v5 LOC8073395 LOC102580861 LOC102601905 LOC102620397 LOC100838659 LOC100822604 LOC107814099 LOC107792354
Function* signal recognition particle 19 kDa protein, putative / SRP19 uncharacterized LOC100500027 signal recognition particle 19 kDa protein-like signal recognition particle 19 kDa protein signal recognition particle 19 kDa protein-like signal recognition particle 19 kDa protein signal recognition particle 19 kDa protein signal recognition particle 19 kDa protein signal recognition particle 19 kDa protein signal recognition particle 19 kDa protein signal recognition particle 19 kDa protein signal recognition particle 19 kDa protein signal recognition particle 19 kDa protein signal recognition particle 19 kDa protein signal recognition particle 19 kDa protein signal recognition particle 19 kDa protein signal recognition particle 19 kDa protein signal recognition particle 19 kDa protein signal recognition particle 19 kDa protein signal recognition particle 19 kDa protein-like signal recognition particle 19 kDa protein uncharacterized protein signal recognition particle 19 kDa protein signal recognition particle 19 kDa protein-like signal recognition particle 19 kDa protein signal recognition particle 19 kDa protein uncharacterized LOC100838659 signal recognition particle 19 kDa protein signal recognition particle 19 kDa protein-like signal recognition particle 19 kDa protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03060 Protein export 3
ath04130 SNARE interactions in vesicular transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 5
gma03050 Proteasome 3
gma03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 3
gma04144 Endocytosis 2
gma03420 Nucleotide excision repair 2
gma03060 Protein export 2
gma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03060 Protein export 3
sly03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03050 Proteasome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 4
zma03060 Protein export 3
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03060 Protein export 2
zma03083 Polycomb repressive complex 2
zma04120 Ubiquitin mediated proteolysis 2
zma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 6
ppo03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 6
tae03060 Protein export 3
tae04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 7
tae03060 Protein export 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 15
ghi03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 18
ghi03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03060 Protein export 3
bna00510 N-Glycan biosynthesis 2
bna00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03060 Protein export 3
bna00510 N-Glycan biosynthesis 2
bna00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03060 Protein export 3
sbi03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03060 Protein export 6
sot04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03060 Protein export 5
sot04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04141 Protein processing in endoplasmic reticulum 7
bdi03060 Protein export 5
bdi03040 Spliceosome 2
bdi00510 N-Glycan biosynthesis 2
bdi00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03060 Protein export 4
nta00510 N-Glycan biosynthesis 2
nta00513 Various types of N-glycan biosynthesis 2
nta04141 Protein processing in endoplasmic reticulum 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 841235 100500027 100801614 101248030 4340957 100282410 103645776 103868692 103833043 100264739 100854647 7493484 7462510 25499231 123166765 123147737 123410823 121230849 107960275 125577000 106425169 5727715 8073395 102580861 102601905 102620397 100838659 100822604 107814099 107792354
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