ATTED-II : GeneCoexpression result

Species	Gene	Description
gma-u.5	100500515	uncharacterized LOC100500515
gma-r.7	100500515	uncharacterized LOC100500515
gma-m.5	100500515	uncharacterized LOC100500515
mtr-u.5	112421124	uncharacterized protein C12B10.15c
ppo-u.5	18103901	uncharacterized protein C12B10.15c
ath-u.5	AT2G39440	ribonuclease H2 subunit C-like protein
vvi-u.5	100252517	uncharacterized LOC100252517
sly-u.5	101254055	uncharacterized protein C12B10.15c
osa-u.5	4328433	uncharacterized protein C12B10.15c
zma-u.5	103626668	uncharacterized LOC103626668
zma-u.5	100275043	uncharacterized LOC100275043

functional annotation

KEGG

gmx03030 [list] [network] DNA replication (69 genes)

GO BP

GO:0006401 [list] [network] RNA catabolic process

(149 genes)

IEA

GO CC

GO:0032299 [list] [network] ribonuclease H2 complex

(5 genes)

IEA

GO MF

Protein

NP_001235469.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 4, nucl_plas 3, chlo 1, extr 1, cyto 1, mito 1, pero 1, cyto_pero 1

(predict for NP_001235469.1)

Subcellular
localization
TargetP

other 9

(predict for NP_001235469.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	gma-u.5 for 100500515	gma-r.7 for 100500515	gma-m.5 for 100500515	mtr-u.5 for 112421124	ppo-u.5 for 18103901	ath-u.5 for AT2G39440	vvi-u.5 for 100252517	sly-u.5 for 101254055	osa-u.5 for 4328433	zma-u.5 for 103626668	zma-u.5 for 100275043

Ortholog ID: 8418

Species

gma

mtr

ppo

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

uncharacterized LOC100500515

uncharacterized protein C12B10.15c

ribonuclease H2 subunit C-like protein

ribonuclease H2 subunit C

uncharacterized LOC100252517

ribonuclease H2 subunit C

ribonuclease H2 subunit C-like

uncharacterized LOC102623981

uncharacterized protein C12B10.15c

ribonuclease H2 subunit C

uncharacterized LOC107784016

uncharacterized LOC107800945

uncharacterized protein C12B10.15c

uncharacterized LOC100275043

uncharacterized LOC103626668

ribonuclease H2 subunit C

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03082	ATP-dependent chromatin remodeling	3
gma03030	DNA replication	2
gma03083	Polycomb repressive complex	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03010	Ribosome	7
mtr03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03022	Basal transcription factors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00190	Oxidative phosphorylation	2
bra03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03030	DNA replication	7
vvi03410	Base excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03030	DNA replication	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03030	DNA replication	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04144	Endocytosis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03030	DNA replication	12
sly03420	Nucleotide excision repair	4
sly03430	Mismatch repair	3
sly00240	Pyrimidine metabolism	2
sly01232	Nucleotide metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03040	Spliceosome	2
sot00920	Sulfur metabolism	2
sot03010	Ribosome	2
sot04145	Phagosome	2
sot00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03030	DNA replication	3
nta04148	Efferocytosis	2
nta04517	IgSF CAM signaling	2
nta04620	Toll-like receptor signaling pathway	2
nta04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03030	DNA replication	9
nta04148	Efferocytosis	2
nta04517	IgSF CAM signaling	2
nta04620	Toll-like receptor signaling pathway	2
nta04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03010	Ribosome	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03030	DNA replication	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03030	DNA replication	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03010	Ribosome	6
tae03008	Ribosome biogenesis in eukaryotes	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03010	Ribosome	15

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03040	Spliceosome	6
sbi03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03010	Ribosome	4
bdi03018	RNA degradation	2
bdi03030	DNA replication	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre03030	DNA replication	11
cre03410	Base excision repair	7
cre03420	Nucleotide excision repair	7
cre03430	Mismatch repair	7
cre03440	Homologous recombination	2

Expression

Expression pattern

Entrez Gene ID^*

100500515

112421124

18103901

818529

103867044

100252517

107903328

121216959

106394689

102623981

101254055

102604145

107784016

107800945

4328433

100275043

103626668

123132438

123401112

8077173

100838095

5719910

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 100500515 (gma-u.5 coexpression data)

Top 50 enrichment test to 100500515 (gma-u.5 coexpression data)


Species	gma	mtr	ppo	ath	vvi	sly	osa	zma	bdi	hvu	bra	cit	bna	sbi	ghi	sot	nta	cre	tae
Paralog	3	1	1	1	1	1	1	2	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100500515 (gma-u.5 coexpression data)

Top 50 enrichment test to 100500515 (gma-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**