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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100527868   uncharacterized LOC100527868 
 gma-r.7   100527868   uncharacterized LOC100527868 
 gma-u.5   100783539   protein PLASTID TRANSCRIPTIONALLY ACTIVE 7-like 
 mtr-u.5   25491129   protein PLASTID TRANSCRIPTIONALLY ACTIVE 7 
 ppo-u.5   7464533   protein PLASTID TRANSCRIPTIONALLY ACTIVE 7 
 ath-u.5   PTAC7   plastid transcriptionally active7 
 bra-r.6   103874300   protein PLASTID TRANSCRIPTIONALLY ACTIVE 7 
 vvi-u.5   100244197   protein PLASTID TRANSCRIPTIONALLY ACTIVE 7 
 ghi-r.1   107929551   protein PLASTID TRANSCRIPTIONALLY ACTIVE 7 
 bna-r.1   106348266   protein PLASTID TRANSCRIPTIONALLY ACTIVE 7 
 bna-r.1   106415415   protein PLASTID TRANSCRIPTIONALLY ACTIVE 7 
 cit-r.1   102612330   protein PLASTID TRANSCRIPTIONALLY ACTIVE 7 
 sly-u.5   101262600   protein PLASTID TRANSCRIPTIONALLY ACTIVE 7 
 sot-r.1   102596113   protein PLASTID TRANSCRIPTIONALLY ACTIVE 7 
 nta-r.1   107767271   protein PLASTID TRANSCRIPTIONALLY ACTIVE 7 
 nta-r.1   107760362   protein PLASTID TRANSCRIPTIONALLY ACTIVE 7-like 
 osa-u.5   4324255   protein PLASTID TRANSCRIPTIONALLY ACTIVE 7 
 osa-u.5   112937372   protein PLASTID TRANSCRIPTIONALLY ACTIVE 7-like 
 zma-u.5   100276635   uncharacterized LOC100276635 
 zma-u.5   100273331   Protein PLASTID TRANSCRIPTIONALLY ACTIVE 7 
 tae-r.2   123070424   protein PLASTID TRANSCRIPTIONALLY ACTIVE 7 
 tae-r.2   123078870   protein PLASTID TRANSCRIPTIONALLY ACTIVE 7 
 tae-r.2   123061766   protein PLASTID TRANSCRIPTIONALLY ACTIVE 7 
 hvu-r.1   123444224   protein PLASTID TRANSCRIPTIONALLY ACTIVE 7 
 sbi-r.1   8059157   uncharacterized LOC8059157 
 bdi-r.1   100838181   protein PLASTID TRANSCRIPTIONALLY ACTIVE 7 

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Top 50 coexpressed genes to 100527868 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100527868 (gma-u.5 coexpression data)

CoexMap"100527868"


gmaLOC100527868 | Entrez gene ID : 100527868      
Species gma mtr ppo ath bra vvi ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre
Paralog 3 1 1 1 1 1 1 2 1 1 1 2 2 2 3 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0042793 [list] [network] plastid transcription  (9 genes)  IEA  
GO CC
GO:0000427 [list] [network] plastid-encoded plastid RNA polymerase complex  (9 genes)  IEA  
GO MF
Protein NP_001238706.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  cyto 1  (predict for NP_001238706.1)
Subcellular
localization
TargetP
chlo 3  (predict for NP_001238706.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100527868
gma-r.7
for
100527868
gma-u.5
for
100783539
mtr-u.5
for
25491129
ppo-u.5
for
7464533
ath-u.5
for
PTAC7
bra-r.6
for
103874300
vvi-u.5
for
100244197
ghi-r.1
for
107929551
bna-r.1
for
106348266
bna-r.1
for
106415415
cit-r.1
for
102612330
sly-u.5
for
101262600
sot-r.1
for
102596113
nta-r.1
for
107767271
nta-r.1
for
107760362
osa-u.5
for
4324255
osa-u.5
for
112937372
zma-u.5
for
100276635
zma-u.5
for
100273331
tae-r.2
for
123070424
tae-r.2
for
123078870
tae-r.2
for
123061766
hvu-r.1
for
123444224
sbi-r.1
for
8059157
bdi-r.1
for
100838181


Ortholog ID: 10325
Species gma gma mtr ppo ath bra vvi ghi bna bna cit sly sot nta nta osa osa zma zma tae tae tae hvu sbi bdi
Symbol LOC100527868 LOC100783539 LOC25491129 LOC7464533 PTAC7 LOC103874300 LOC100244197 LOC107929551 LOC106348266 LOC106415415 LOC102612330 LOC101262600 LOC102596113 LOC107767271 LOC107760362 LOC4324255 LOC112937372 LOC100276635 LOC100273331 LOC123070424 LOC123078870 LOC123061766 LOC123444224 LOC8059157 LOC100838181
Function* uncharacterized LOC100527868 protein PLASTID TRANSCRIPTIONALLY ACTIVE 7-like protein PLASTID TRANSCRIPTIONALLY ACTIVE 7 protein PLASTID TRANSCRIPTIONALLY ACTIVE 7 plastid transcriptionally active7 protein PLASTID TRANSCRIPTIONALLY ACTIVE 7 protein PLASTID TRANSCRIPTIONALLY ACTIVE 7 protein PLASTID TRANSCRIPTIONALLY ACTIVE 7 protein PLASTID TRANSCRIPTIONALLY ACTIVE 7 protein PLASTID TRANSCRIPTIONALLY ACTIVE 7 protein PLASTID TRANSCRIPTIONALLY ACTIVE 7 protein PLASTID TRANSCRIPTIONALLY ACTIVE 7 protein PLASTID TRANSCRIPTIONALLY ACTIVE 7 protein PLASTID TRANSCRIPTIONALLY ACTIVE 7 protein PLASTID TRANSCRIPTIONALLY ACTIVE 7-like protein PLASTID TRANSCRIPTIONALLY ACTIVE 7 protein PLASTID TRANSCRIPTIONALLY ACTIVE 7-like uncharacterized LOC100276635 Protein PLASTID TRANSCRIPTIONALLY ACTIVE 7 protein PLASTID TRANSCRIPTIONALLY ACTIVE 7 protein PLASTID TRANSCRIPTIONALLY ACTIVE 7 protein PLASTID TRANSCRIPTIONALLY ACTIVE 7 protein PLASTID TRANSCRIPTIONALLY ACTIVE 7 uncharacterized LOC8059157 protein PLASTID TRANSCRIPTIONALLY ACTIVE 7
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00860 Porphyrin metabolism 3
gma01240 Biosynthesis of cofactors 3
gma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04141 Protein processing in endoplasmic reticulum 3
gma03018 RNA degradation 3
gma03040 Spliceosome 2
gma04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00906 Carotenoid biosynthesis 2
tae00061 Fatty acid biosynthesis 2
tae00780 Biotin metabolism 2
tae01212 Fatty acid metabolism 2
tae01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00061 Fatty acid biosynthesis 3
tae00780 Biotin metabolism 3
tae01212 Fatty acid metabolism 3
tae01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 4
tae03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01240 Biosynthesis of cofactors 2
hvu00562 Inositol phosphate metabolism 2
hvu04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 8
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100527868 100783539 25491129 7464533 832500 103874300 100244197 107929551 106348266 106415415 102612330 101262600 102596113 107767271 107760362 4324255 112937372 100276635 100273331 123070424 123078870 123061766 123444224 8059157 100838181
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