Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   CHRD   constitutive plastid-lipid associated protein 
 sly-r.6   CHRD   constitutive plastid-lipid associated protein 
 sly-m.5   CHRD   constitutive plastid-lipid associated protein 
 sly-u.5   CHRDi   inducible plastid-lipid associated protein 
 ath-u.5   AT3G20390   endoribonuclease L-PSP family protein 
 gma-u.5   100527559   RidA-like protein 
 gma-u.5   100500302   reactive intermediate deaminase A-like 
 gma-u.5   100792467   reactive Intermediate Deaminase A, chloroplastic 
 vvi-u.5   100265829   reactive Intermediate Deaminase A, chloroplastic 
 ppo-u.5   7454441   reactive Intermediate Deaminase A, chloroplastic 
 ppo-u.5   18110344   reactive Intermediate Deaminase A, chloroplastic 
 mtr-u.5   25488952   reactive Intermediate Deaminase A, chloroplastic 
 mtr-u.5   11425862   reactive Intermediate Deaminase A, chloroplastic 
 osa-u.5   4343379   reactive Intermediate Deaminase A, chloroplastic 
 zma-u.5   100273379   reactive Intermediate Deaminase A, chloroplastic 

close


Top 50 coexpressed genes to CHRD (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to CHRD (sly-u.5 coexpression data)

CoexMap"100736438"


slyCHRD | Entrez gene ID : 100736438      
Species sly ath gma vvi ppo mtr osa zma cre ghi cit hvu bdi sot bra sbi tae nta bna
Paralog 4 1 3 1 2 2 1 1 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005739 [list] [network] mitochondrion  (608 genes)  IEA  
GO:0005829 [list] [network] cytosol  (916 genes)  IEA  
GO MF
GO:0019239 [list] [network] deaminase activity  (13 genes)  IEA  
Protein NP_001234510.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  nucl 1,  cysk_nucl 1  (predict for NP_001234510.1)
Subcellular
localization
TargetP
mito 3  (predict for NP_001234510.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
CHRD

.
sly-r.6
for
CHRD

.
sly-m.5
for
CHRD

.
sly-u.5
for
CHRDi

.
ath-u.5
for
AT3G20390

.
gma-u.5
for
100527559

.
gma-u.5
for
100500302

.
gma-u.5
for
100792467

.
vvi-u.5
for
100265829

.
ppo-u.5
for
7454441

.
ppo-u.5
for
18110344

.
mtr-u.5
for
25488952

.
mtr-u.5
for
11425862

.
osa-u.5
for
4343379

.
zma-u.5
for
100273379

.


Ortholog ID: 4916
Species ath gma gma sly sly osa zma bra vvi ppo ppo mtr mtr tae tae hvu ghi ghi bna bna cre sbi sot sot cit bdi nta nta
Symbol AT3G20390 LOC100500302 LOC100785544 CHRD CHRDi LOC4343379 LOC100273379 LOC103859855 LOC100265829 LOC18110344 LOC7454441 LOC25488952 LOC11425862 LOC123052549 LOC123044680 LOC123425896 LOC121212488 LOC107920754 LOC125598464 LOC106379534 CHLRE_16g669650v5 LOC110433044 LOC102581296 LOC102592473 LOC102610474 LOC100823741 LOC107806226 LOC107769967
Function* endoribonuclease L-PSP family protein reactive intermediate deaminase A-like reactive Intermediate Deaminase A, chloroplastic constitutive plastid-lipid associated protein inducible plastid-lipid associated protein reactive Intermediate Deaminase A, chloroplastic reactive Intermediate Deaminase A, chloroplastic reactive Intermediate Deaminase A, chloroplastic reactive Intermediate Deaminase A, chloroplastic reactive Intermediate Deaminase A, chloroplastic reactive Intermediate Deaminase A, chloroplastic reactive Intermediate Deaminase A, chloroplastic reactive Intermediate Deaminase A, chloroplastic reactive Intermediate Deaminase A, chloroplastic reactive Intermediate Deaminase A, chloroplastic reactive Intermediate Deaminase A, chloroplastic reactive Intermediate Deaminase A, chloroplastic reactive Intermediate Deaminase A, chloroplastic reactive Intermediate Deaminase A, chloroplastic-like reactive Intermediate Deaminase A, chloroplastic-like uncharacterized protein reactive Intermediate Deaminase A, chloroplastic reactive Intermediate Deaminase A, chloroplastic reactive Intermediate Deaminase A, chloroplastic-like reactive Intermediate Deaminase A, chloroplastic reactive Intermediate Deaminase A, chloroplastic reactive Intermediate Deaminase A, chloroplastic reactive Intermediate Deaminase A, chloroplastic
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00920 Sulfur metabolism 4
ath00966 Glucosinolate biosynthesis 3
ath01320 Sulfur cycle 3
ath00380 Tryptophan metabolism 2
ath01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01230 Biosynthesis of amino acids 8
gma00220 Arginine biosynthesis 5
gma03010 Ribosome 2
gma00300 Lysine biosynthesis 2
gma01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00190 Oxidative phosphorylation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01230 Biosynthesis of amino acids 6
sly01210 2-Oxocarboxylic acid metabolism 5
sly01240 Biosynthesis of cofactors 3
sly00290 Valine, leucine and isoleucine biosynthesis 3
sly00250 Alanine, aspartate and glutamate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01230 Biosynthesis of amino acids 4
sly00220 Arginine biosynthesis 3
sly00480 Glutathione metabolism 2
sly01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01230 Biosynthesis of amino acids 12
osa01210 2-Oxocarboxylic acid metabolism 5
osa00340 Histidine metabolism 3
osa00250 Alanine, aspartate and glutamate metabolism 3
osa00260 Glycine, serine and threonine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00190 Oxidative phosphorylation 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01230 Biosynthesis of amino acids 6
bra00270 Cysteine and methionine metabolism 4
bra00920 Sulfur metabolism 3
bra01200 Carbon metabolism 2
bra00260 Glycine, serine and threonine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00190 Oxidative phosphorylation 2
vvi04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00190 Oxidative phosphorylation 3
ppo00020 Citrate cycle (TCA cycle) 2
ppo00270 Cysteine and methionine metabolism 2
ppo00566 Sulfoquinovose metabolism 2
ppo00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00190 Oxidative phosphorylation 9
mtr00020 Citrate cycle (TCA cycle) 4
mtr01200 Carbon metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01240 Biosynthesis of cofactors 4
tae00480 Glutathione metabolism 3
tae00130 Ubiquinone and other terpenoid-quinone biosynthesis 3
tae00330 Arginine and proline metabolism 2
tae01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00480 Glutathione metabolism 3
tae00330 Arginine and proline metabolism 2
tae01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00190 Oxidative phosphorylation 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00190 Oxidative phosphorylation 9
ghi00270 Cysteine and methionine metabolism 2
ghi00920 Sulfur metabolism 2
ghi04122 Sulfur relay system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00190 Oxidative phosphorylation 10
ghi01230 Biosynthesis of amino acids 4
ghi00330 Arginine and proline metabolism 2
ghi00340 Histidine metabolism 2
ghi00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00190 Oxidative phosphorylation 4
bna00480 Glutathione metabolism 2
bna00020 Citrate cycle (TCA cycle) 2
bna00640 Propanoate metabolism 2
bna01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00920 Sulfur metabolism 3
cre01230 Biosynthesis of amino acids 3
cre00270 Cysteine and methionine metabolism 2
cre01200 Carbon metabolism 2
cre01320 Sulfur cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 6
sbi03020 RNA polymerase 3
sbi03420 Nucleotide excision repair 3
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00010 Glycolysis / Gluconeogenesis 3
sot01230 Biosynthesis of amino acids 3
sot00480 Glutathione metabolism 2
sot00220 Arginine biosynthesis 2
sot00330 Arginine and proline metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01230 Biosynthesis of amino acids 7
sot00190 Oxidative phosphorylation 3
sot00300 Lysine biosynthesis 2
sot00340 Histidine metabolism 2
sot00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 7
cit01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00190 Oxidative phosphorylation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00190 Oxidative phosphorylation 10
nta01240 Biosynthesis of cofactors 4
nta00230 Purine metabolism 2
nta00240 Pyrimidine metabolism 2
nta01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00190 Oxidative phosphorylation 11
nta01240 Biosynthesis of cofactors 4
nta00230 Purine metabolism 2
nta00240 Pyrimidine metabolism 2
nta01232 Nucleotide metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 821584 100500302 100785544 100736438 101248695 4343379 100273379 103859855 100265829 18110344 7454441 25488952 11425862 123052549 123044680 123425896 121212488 107920754 125598464 106379534 5724780 110433044 102581296 102592473 102610474 100823741 107806226 107769967
The preparation time of this page was 0.1 [sec].