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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   ARF19B   auxin response factor 19b 
 sly-r.6   ARF19B   auxin response factor 19b 
 sly-u.5   ARF19A   auxin response factor 19a 
 gma-u.5   100790644   auxin response factor 19 
 gma-u.5   100817780   auxin response factor 19 
 gma-u.5   100803302   auxin response factor 19 
 vvi-u.5   100263801   auxin response factor 19 
 ppo-u.5   18107849   auxin response factor 19 
 ppo-u.5   18099958   auxin response factor 19 
 mtr-u.5   11436511   auxin response factor 19 
 osa-u.5   4328265   auxin response factor 5 
 osa-u.5   4341978   auxin response factor 19-like 
 osa-u.5   4346065   auxin response factor 21-like 
 zma-u.5   103626605   auxin response factor 5 
 zma-u.5   103642400   auxin response factor 21 
 zma-u.5   103626415   auxin response factor 19 

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Top 50 coexpressed genes to ARF19B (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to ARF19B (sly-u.5 coexpression data)

CoexMap"100736463"


slyARF19B | Entrez gene ID : 100736463      
Species sly gma vvi ppo mtr osa zma cre ghi cit hvu bdi sot bra sbi tae ath nta bna
Paralog 3 3 1 2 1 3 3 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009725 [list] [network] response to hormone  (341 genes)  IEA  
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1608 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (2947 genes)  IEA  
GO MF
GO:0003677 [list] [network] DNA binding  (1883 genes)  IEA  
GO:0005515 [list] [network] protein binding  (3982 genes)  IEA  
Protein NP_001234605.1 [sequence] [blastp]
XP_010321285.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9,  cyto 1,  cysk 1  (predict for NP_001234605.1)
nucl 9,  cyto 1,  cysk 1  (predict for XP_010321285.1)
Subcellular
localization
TargetP
other 7  (predict for NP_001234605.1)
other 8  (predict for XP_010321285.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
ARF19B

.
sly-r.6
for
ARF19B

.
sly-u.5
for
ARF19A

.
gma-u.5
for
100790644

.
gma-u.5
for
100817780

.
gma-u.5
for
100803302

.
vvi-u.5
for
100263801

.
ppo-u.5
for
18107849

.
ppo-u.5
for
18099958

.
mtr-u.5
for
11436511

.
osa-u.5
for
4328265

.
osa-u.5
for
4341978

.
osa-u.5
for
4346065

.
zma-u.5
for
103626605

.
zma-u.5
for
103642400

.
zma-u.5
for
103626415

.


Ortholog ID: 4487
Species gma gma sly sly osa osa zma zma vvi ppo ppo mtr tae tae hvu hvu ghi ghi sbi sbi sot sot cit bdi bdi nta nta
Symbol LOC100817780 LOC100790644 ARF19B ARF19A LOC4328265 LOC4346065 LOC103642400 LOC103626605 LOC100263801 LOC18107849 LOC18099958 LOC11436511 LOC123157528 LOC123132208 LOC123411269 LOC123412375 LOC107904307 LOC107931591 LOC8063839 LOC8062825 LOC102587769 LOC102592438 LOC102620808 LOC100842244 LOC100822102 LOC107802735 LOC107771003
Function* auxin response factor 19 auxin response factor 19 auxin response factor 19b auxin response factor 19a auxin response factor 5 auxin response factor 21-like auxin response factor 21 auxin response factor 5 auxin response factor 19 auxin response factor 19 auxin response factor 19 auxin response factor 19 auxin response factor 21 auxin response factor 5 auxin response factor 19-like auxin response factor 21-like auxin response factor 19 auxin response factor 19 auxin response factor 19 auxin response factor 5 auxin response factor 19-like auxin response factor 19 auxin response factor 19-like auxin response factor 5 auxin response factor 19 auxin response factor 19-like auxin response factor 19-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04146 Peroxisome 3
gma00230 Purine metabolism 2
gma00232 Caffeine metabolism 2
gma01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04075 Plant hormone signal transduction 4
vvi04016 MAPK signaling pathway - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04120 Ubiquitin mediated proteolysis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04120 Ubiquitin mediated proteolysis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 2
mtr00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01200 Carbon metabolism 4
hvu00030 Pentose phosphate pathway 2
hvu00480 Glutathione metabolism 2
hvu00620 Pyruvate metabolism 2
hvu00910 Nitrogen metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00561 Glycerolipid metabolism 2
hvu00564 Glycerophospholipid metabolism 2
hvu00562 Inositol phosphate metabolism 2
hvu04070 Phosphatidylinositol signaling system 2
hvu04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03022 Basal transcription factors 2
ghi03060 Protein export 2
ghi03013 Nucleocytoplasmic transport 2
ghi03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03022 Basal transcription factors 2
ghi03060 Protein export 2
ghi03013 Nucleocytoplasmic transport 2
ghi03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00410 beta-Alanine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04016 MAPK signaling pathway - plant 2
bdi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04120 Ubiquitin mediated proteolysis 2
nta04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100817780 100790644 100736463 100498663 4328265 4346065 103642400 103626605 100263801 18107849 18099958 11436511 123157528 123132208 123411269 123412375 107904307 107931591 8063839 8062825 102587769 102592438 102620808 100842244 100822102 107802735 107771003
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