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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   TCP20   TCP transcription factor 20 
 sly-r.6   TCP20   TCP transcription factor 20 
 sly-u.5   TCP21   TCP transcription factor 21 
 ath-u.5   AT5G51910   TCP family transcription factor 
 gma-u.5   100819475   transcription factor TCP19 
 gma-u.5   100816220   transcription factor TCP19 
 gma-u.5   100814309   transcription factor TCP9 
 vvi-u.5   100245358   transcription factor TCP9 
 vvi-u.5   100249539   transcription factor TCP9 
 ppo-u.5   7478084   transcription factor TCP9 
 ppo-u.5   7474020   transcription factor TCP19 
 mtr-u.5   25500981   transcription factor TCP9 
 mtr-u.5   11414668   transcription factor TCP19 
 osa-u.5   4346214   transcription factor PCF2-like 
 zma-u.5   100192578   Transcription factor TCP9 
 zma-u.5   103643109   uncharacterized LOC103643109 

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Top 50 coexpressed genes to TCP20 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to TCP20 (sly-u.5 coexpression data)

CoexMap"100736547"


slyTCP20 | Entrez gene ID : 100736547      
Species sly ath gma vvi ppo mtr osa zma bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 3 1 3 2 2 2 1 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (2947 genes)  IEA  
GO MF
GO:0043565 [list] [network] sequence-specific DNA binding  (778 genes)  IEA  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1125 genes)  IEA  
Protein NP_001233956.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for NP_001233956.2)
Subcellular
localization
TargetP
other 9  (predict for NP_001233956.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
TCP20
sly-r.6
for
TCP20
sly-u.5
for
TCP21
ath-u.5
for
AT5G51910
gma-u.5
for
100819475
gma-u.5
for
100816220
gma-u.5
for
100814309
vvi-u.5
for
100245358
vvi-u.5
for
100249539
ppo-u.5
for
7478084
ppo-u.5
for
7474020
mtr-u.5
for
25500981
mtr-u.5
for
11414668
osa-u.5
for
4346214
zma-u.5
for
100192578
zma-u.5
for
103643109


Ortholog ID: 2401
Species sly sly sot nta nta ath gma gma bra bra vvi vvi ppo ppo mtr mtr ghi ghi bna bna cit cit osa zma zma hvu sbi sbi bdi bdi
Symbol TCP21 TCP20 LOC102587457 LOC107780669 LOC107762769 AT5G51910 LOC100819475 LOC100781096 LOC103858182 LOC103866914 LOC100245358 LOC100249539 LOC7478084 LOC7474020 LOC25500981 LOC11414668 LOC107911937 LOC107957277 LOC106390338 LOC106438256 LOC102610528 LOC102628831 LOC4346214 LOC100192578 LOC103643109 LOC123399398 LOC8059025 LOC110436807 LOC100832369 LOC100829942
Function* TCP transcription factor 21 TCP transcription factor 20 transcription factor TCP19 transcription factor TCP19-like transcription factor TCP19 TCP family transcription factor transcription factor TCP19 transcription factor TCP9 transcription factor TCP9 transcription factor TCP9 transcription factor TCP9 transcription factor TCP9 transcription factor TCP9 transcription factor TCP19 transcription factor TCP9 transcription factor TCP19 transcription factor TCP9 transcription factor TCP9 transcription factor TCP9 transcription factor TCP9-like transcription factor TCP19 transcription factor TCP9-like transcription factor PCF2-like Transcription factor TCP9 uncharacterized LOC103643109 transcription factor PCF2-like transcription factor PCF2 transcription factor PCF2-like transcription factor PCF2 transcription factor PCF2
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00940 Phenylpropanoid biosynthesis 6
gma00130 Ubiquinone and other terpenoid-quinone biosynthesis 3
gma00941 Flavonoid biosynthesis 3
gma00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00130 Ubiquinone and other terpenoid-quinone biosynthesis 3
bra00350 Tyrosine metabolism 3
bra00360 Phenylalanine metabolism 3
bra01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04075 Plant hormone signal transduction 4
vvi04016 MAPK signaling pathway - plant 3
vvi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00500 Starch and sucrose metabolism 3
vvi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01240 Biosynthesis of cofactors 3
ppo03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00908 Zeatin biosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00908 Zeatin biosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01240 Biosynthesis of cofactors 2
cit00010 Glycolysis / Gluconeogenesis 2
cit00020 Citrate cycle (TCA cycle) 2
cit00620 Pyruvate metabolism 2
cit00785 Lipoic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 3
osa04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00908 Zeatin biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100736523 100736547 102587457 107780669 107762769 835266 100819475 100781096 103858182 103866914 100245358 100249539 7478084 7474020 25500981 11414668 107911937 107957277 106390338 106438256 102610528 102628831 4346214 100192578 103643109 123399398 8059025 110436807 100832369 100829942
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