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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100775985   WD repeat-containing protein 48 
 gma-r.7   100775985   WD repeat-containing protein 48 
 gma-m.5   100775985   WD repeat-containing protein 48 
 gma-u.5   100792334   WD repeat-containing protein 48 
 gma-u.5   100788971   WD repeat-containing protein 48 
 gma-u.5   100791786   WD repeat-containing protein 48 
 mtr-u.5   11433323   WD repeat-containing protein 48 
 mtr-u.5   25484665   WD repeat-containing protein 48 
 ppo-u.5   18110960   uncharacterized LOC18110960 
 ppo-u.5   18098902   uncharacterized LOC18098902 
 ath-u.5   LRS1   Transducin/WD40 repeat-like superfamily protein 
 vvi-u.5   100248769   uncharacterized LOC100248769 
 sly-u.5   101249305   WD repeat-containing protein 
 sly-u.5   101244688   uncharacterized LOC101244688 
 osa-u.5   4351590   uncharacterized LOC4351590 
 zma-u.5   103640814   WD repeat-containing protein 48 
 zma-u.5   103650664   WD repeat-containing protein 48 

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Top 50 coexpressed genes to 100775985 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100775985 (gma-u.5 coexpression data)

CoexMap"100775985"


gmaLOC100775985 | Entrez gene ID : 100775985      
Species gma mtr ppo ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 6 2 2 1 1 2 1 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG gmx03460 [list] [network] Fanconi anemia pathway (49 genes)
GO BP
GO:0000724 [list] [network] double-strand break repair via homologous recombination  (164 genes)  IEA  
GO CC
GO MF
GO:0043130 [list] [network] ubiquitin binding  (111 genes)  IEA  
Protein XP_003553747.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  mito 3,  chlo 2,  cysk 1,  cyto_mito 1,  mito_plas 1  (predict for XP_003553747.1)
Subcellular
localization
TargetP
other 5,  mito 3  (predict for XP_003553747.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100775985

.
gma-r.7
for
100775985

.
gma-m.5
for
100775985

.
gma-u.5
for
100792334

.
gma-u.5
for
100788971

.
gma-u.5
for
100791786

.
mtr-u.5
for
11433323

.
mtr-u.5
for
25484665

.
ppo-u.5
for
18110960

.
ppo-u.5
for
18098902

.
ath-u.5
for
LRS1

.
vvi-u.5
for
100248769

.
sly-u.5
for
101249305

.
sly-u.5
for
101244688

.
osa-u.5
for
4351590

.
zma-u.5
for
103640814

.
zma-u.5
for
103650664

.


Ortholog ID: 4373
Species ath gma gma sly sly osa zma zma bra vvi ppo ppo mtr mtr tae tae hvu ghi ghi bna bna cre sbi sot sot cit bdi nta nta
Symbol LRS1 LOC100792334 LOC100775985 LOC101244688 LOC101249305 LOC4351590 LOC103650664 LOC103640814 LOC103859075 LOC100248769 LOC18098902 LOC18110960 LOC11433323 LOC25484665 LOC123111101 LOC123102940 LOC123399179 LOC107899144 LOC107893602 LOC106453019 LOC106453063 CHLRE_13g583250v5 LOC110429704 LOC102603653 LOC102578423 LOC102621542 LOC100833130 LOC107831097 LOC107776162
Function* Transducin/WD40 repeat-like superfamily protein WD repeat-containing protein 48 WD repeat-containing protein 48 uncharacterized LOC101244688 WD repeat-containing protein uncharacterized LOC4351590 WD repeat-containing protein 48 WD repeat-containing protein 48 WD repeat-containing protein 48 uncharacterized LOC100248769 uncharacterized LOC18098902 uncharacterized LOC18110960 WD repeat-containing protein 48 WD repeat-containing protein 48 WD repeat-containing protein 48 WD repeat-containing protein 48 WD repeat-containing protein 48 WD repeat-containing protein 48 WD repeat-containing protein 48 WD repeat-containing protein 48 WD repeat-containing protein 48 uncharacterized protein WD repeat-containing protein 48 WD repeat-containing protein 48-like WD repeat-containing protein 48 uncharacterized LOC102621542 WD repeat-containing protein 48 uncharacterized LOC107831097 uncharacterized LOC107776162
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03013 Nucleocytoplasmic transport 3
ath03015 mRNA surveillance pathway 2
ath04382 Cornified envelope formation 2
ath04016 MAPK signaling pathway - plant 2
ath04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03460 Fanconi anemia pathway 4
gma04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03460 Fanconi anemia pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 3
sly03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04144 Endocytosis 3
osa00562 Inositol phosphate metabolism 2
osa04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04141 Protein processing in endoplasmic reticulum 2
zma03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03083 Polycomb repressive complex 2
zma03250 Viral life cycle - HIV-1 2
zma03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04136 Autophagy - other 4
bra00562 Inositol phosphate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00010 Glycolysis / Gluconeogenesis 2
ppo00020 Citrate cycle (TCA cycle) 2
ppo00620 Pyruvate metabolism 2
ppo00785 Lipoic acid metabolism 2
ppo01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04120 Ubiquitin mediated proteolysis 2
ppo04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00562 Inositol phosphate metabolism 2
mtr04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03083 Polycomb repressive complex 3
mtr03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03050 Proteasome 4
tae00561 Glycerolipid metabolism 3
tae00564 Glycerophospholipid metabolism 3
tae04070 Phosphatidylinositol signaling system 3
tae03460 Fanconi anemia pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03083 Polycomb repressive complex 5
tae03460 Fanconi anemia pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03460 Fanconi anemia pathway 8
ghi00790 Folate biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03460 Fanconi anemia pathway 8
ghi00562 Inositol phosphate metabolism 2
ghi04070 Phosphatidylinositol signaling system 2
ghi04136 Autophagy - other 2
ghi04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03460 Fanconi anemia pathway 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03460 Fanconi anemia pathway 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00240 Pyrimidine metabolism 2
cre00410 beta-Alanine metabolism 2
cre00770 Pantothenate and CoA biosynthesis 2
cre00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04120 Ubiquitin mediated proteolysis 3
bdi04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03460 Fanconi anemia pathway 2
nta04075 Plant hormone signal transduction 2
nta04136 Autophagy - other 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 819671 100792334 100775985 101244688 101249305 4351590 103650664 103640814 103859075 100248769 18098902 18110960 11433323 25484665 123111101 123102940 123399179 107899144 107893602 106453019 106453063 5719354 110429704 102603653 102578423 102621542 100833130 107831097 107776162
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