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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   778081   transcription factor MYB3R-3 
 gma-u.5   100793280   transcription factor MYB3R-3 
 mtr-u.5   11415521   transcription factor MYB3R-3 
 ppo-u.5   7454926   transcription factor MYB3R-5 
 ath-u.5   MYB3R-3   myb domain protein 3r-3 
 ath-u.5   MYB3R-5   myb domain protein 3r-5 
 bra-r.6   103848147   transcription factor MYB3R-3 
 bra-r.6   103847460   transcription factor MYB3R-5 
 vvi-u.5   100256181   transcription factor MYB3R-3 
 ghi-r.1   107889689   transcription factor MYB3R-3 
 ghi-r.1   107891053   transcription factor MYB3R-3 
 bna-r.1   111206562   transcription factor MYB3R-3 
 bna-r.1   106452734   transcription factor MYB3R-3 
 bna-r.1   106427876   transcription factor MYB3R-3 
 cit-r.1   102616986   transcription factor MYB3R-5 
 sly-u.5   101248605   transcription factor MYB3R-3 
 sot-r.1   102603790   uncharacterized LOC102603790 
 nta-r.1   107820060   transcription factor MYB3R-3 
 nta-r.1   107816660   transcription factor MYB3R-3 
 nta-r.1   107787190   transcription factor MYB3R-3 
 osa-u.5   4339005   transcription factor MYB3R-2-like 
 osa-u.5   4327399   transcription factor MYB3R-2-like 
 zma-u.5   100382779   myb domain protein 3r-3 
 zma-u.5   100285081   uncharacterized LOC100285081 
 tae-r.2   123182256   transcription factor MYB3R-2 
 tae-r.2   123079711   transcription factor MYB3R-2 
 tae-r.2   123062547   transcription factor MYB3R-2 
 hvu-r.1   123445524   transcription factor MYB3R-2-like 
 hvu-r.1   123444927   transcription factor MYB3R-2-like 
 sbi-r.1   8057783   transcription factor MYB3R-2 
 bdi-r.1   100842747   transcription factor MYB3R-2 
 bdi-r.1   100843336   transcription factor MYB3R-2 
 bdi-r.1   100843050   transcription factor MYB3R-2 

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Top 50 coexpressed genes to 778081 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 778081 (gma-u.5 coexpression data)

CoexMap"100777236"


gmaLOC100777236 | Entrez gene ID : 100777236      
Species gma mtr ppo ath bra vvi ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre
Paralog 2 1 1 2 2 1 2 3 1 1 1 3 2 2 3 2 1 3 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006355 [list] [network] regulation of DNA-templated transcription  (3122 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (5531 genes)  IEA  
GO MF
GO:0000978 [list] [network] RNA polymerase II cis-regulatory region sequence-specific DNA binding  (449 genes)  IEA  
GO:0000981 [list] [network] DNA-binding transcription factor activity, RNA polymerase II-specific  (557 genes)  IEA  
Protein XP_003522206.1 [sequence] [blastp]
XP_025983614.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for XP_003522206.1)
nucl 10  (predict for XP_025983614.1)
Subcellular
localization
TargetP
chlo 9  (predict for XP_003522206.1)
chlo 9  (predict for XP_025983614.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
778081
gma-u.5
for
100793280
mtr-u.5
for
11415521
ppo-u.5
for
7454926
ath-u.5
for
MYB3R-3
ath-u.5
for
MYB3R-5
bra-r.6
for
103848147
bra-r.6
for
103847460
vvi-u.5
for
100256181
ghi-r.1
for
107889689
ghi-r.1
for
107891053
bna-r.1
for
111206562
bna-r.1
for
106452734
bna-r.1
for
106427876
cit-r.1
for
102616986
sly-u.5
for
101248605
sot-r.1
for
102603790
nta-r.1
for
107820060
nta-r.1
for
107816660
nta-r.1
for
107787190
osa-u.5
for
4339005
osa-u.5
for
4327399
zma-u.5
for
100382779
zma-u.5
for
100285081
tae-r.2
for
123182256
tae-r.2
for
123079711
tae-r.2
for
123062547
hvu-r.1
for
123445524
hvu-r.1
for
123444927
sbi-r.1
for
8057783
bdi-r.1
for
100842747
bdi-r.1
for
100843336
bdi-r.1
for
100843050


Ortholog ID: 4227
Species gma gma mtr ppo ath ath bra vvi ghi ghi bna bna cit sly sot nta nta nta osa osa zma zma tae tae tae hvu hvu sbi bdi bdi bdi
Symbol LOC778081 LOC100793280 LOC11415521 LOC7454926 MYB3R-3 MYB3R-5 LOC103847460 LOC100256181 LOC107889689 LOC107891053 LOC111206562 LOC125580389 LOC102616986 LOC101248605 LOC102603790 LOC107820060 LOC107787190 LOC107797363 LOC4339005 LOC4327399 LOC100382779 LOC100285081 LOC123079711 LOC123062547 LOC123058964 LOC123445524 LOC123444927 LOC8057783 LOC100842747 LOC100843336 LOC100843050
Function* transcription factor MYB3R-3 transcription factor MYB3R-3 transcription factor MYB3R-3 transcription factor MYB3R-5 myb domain protein 3r-3 myb domain protein 3r-5 transcription factor MYB3R-5 transcription factor MYB3R-3 transcription factor MYB3R-3 transcription factor MYB3R-3 transcription factor MYB3R-3 transcription factor MYB3R-3-like transcription factor MYB3R-5 transcription factor MYB3R-3 uncharacterized LOC102603790 transcription factor MYB3R-3 transcription factor MYB3R-3 transcription factor MYB3R-3-like transcription factor MYB3R-2-like transcription factor MYB3R-2-like myb domain protein 3r-3 uncharacterized LOC100285081 transcription factor MYB3R-2 transcription factor MYB3R-2 transcription factor MYB3R-2 transcription factor MYB3R-2-like transcription factor MYB3R-2-like transcription factor MYB3R-2 transcription factor MYB3R-2 transcription factor MYB3R-2 transcription factor MYB3R-2
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04016 MAPK signaling pathway - plant 2
bra04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00562 Inositol phosphate metabolism 2
ghi04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00562 Inositol phosphate metabolism 2
ghi04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04136 Autophagy - other 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 3
tae03015 mRNA surveillance pathway 3
tae03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03050 Proteasome 3
tae03040 Spliceosome 3
tae03013 Nucleocytoplasmic transport 3
tae03015 mRNA surveillance pathway 3
tae00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04136 Autophagy - other 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03440 Homologous recombination 2
bdi03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03440 Homologous recombination 2
bdi03460 Fanconi anemia pathway 2
bdi04814 Motor proteins 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 778081 100793280 11415521 7454926 820094 831802 103847460 100256181 107889689 107891053 111206562 125580389 102616986 101248605 102603790 107820060 107787190 107797363 4339005 4327399 100382779 100285081 123079711 123062547 123058964 123445524 123444927 8057783 100842747 100843336 100843050
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