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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   778081   transcription factor MYB3R-3 
 gma-r.7   778081   transcription factor MYB3R-3 
 gma-m.5   778081   transcription factor MYB3R-3 
 gma-u.5   100793280   transcription factor MYB3R-3 
 mtr-u.5   11415521   transcription factor MYB3R-3 
 ppo-u.5   7454926   transcription factor MYB3R-5 
 ath-u.5   MYB3R-3   myb domain protein 3r-3 
 ath-u.5   MYB3R-5   myb domain protein 3r-5 
 vvi-u.5   100256181   transcription factor MYB3R-3 
 sly-u.5   101248605   transcription factor MYB3R-3 
 osa-u.5   4339005   transcription factor MYB3R-2-like 
 osa-u.5   4327399   transcription factor MYB3R-2-like 
 zma-u.5   100285081   uncharacterized LOC100285081 
 zma-u.5   100382779   myb domain protein 3r-3 

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Top 50 coexpressed genes to 778081 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 778081 (gma-u.5 coexpression data)

CoexMap"778081"


gmaLOC778081 | Entrez gene ID : 778081    
Species gma mtr ppo ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 4 1 1 2 1 1 2 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006355 [list] [network] regulation of DNA-templated transcription  (3122 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (5531 genes)  IEA  
GO MF
GO:0000978 [list] [network] RNA polymerase II cis-regulatory region sequence-specific DNA binding  (449 genes)  IEA  
GO:0000981 [list] [network] DNA-binding transcription factor activity, RNA polymerase II-specific  (557 genes)  IEA  
Protein XP_006602590.1 [sequence] [blastp]
XP_040868214.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for XP_006602590.1)
nucl 10  (predict for XP_040868214.1)
Subcellular
localization
TargetP
chlo 7,  other 4  (predict for XP_006602590.1)
chlo 7,  other 3  (predict for XP_040868214.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
778081

.
gma-r.7
for
778081

.
gma-m.5
for
778081

.
gma-u.5
for
100793280

.
mtr-u.5
for
11415521

.
ppo-u.5
for
7454926

.
ath-u.5
for
MYB3R-3

.
ath-u.5
for
MYB3R-5

.
vvi-u.5
for
100256181

.
sly-u.5
for
101248605

.
osa-u.5
for
4339005

.
osa-u.5
for
4327399

.
zma-u.5
for
100285081

.
zma-u.5
for
100382779

.


Ortholog ID: 4227
Species ath ath gma sly osa osa zma zma bra vvi ppo mtr tae tae hvu hvu ghi ghi bna sbi sot cit bdi bdi nta nta
Symbol MYB3R-5 MYB3R-3 LOC778081 LOC101248605 LOC4339005 LOC4327399 LOC100382779 LOC100285081 LOC103847460 LOC100256181 LOC7454926 LOC11415521 LOC123062547 LOC123058964 LOC123445524 LOC123444927 LOC107889689 LOC107891053 LOC125580389 LOC8057783 LOC102603790 LOC102616986 LOC100843050 LOC100843336 LOC107820060 LOC107797363
Function* myb domain protein 3r-5 myb domain protein 3r-3 transcription factor MYB3R-3 transcription factor MYB3R-3 transcription factor MYB3R-2-like transcription factor MYB3R-2-like myb domain protein 3r-3 uncharacterized LOC100285081 transcription factor MYB3R-5 transcription factor MYB3R-3 transcription factor MYB3R-5 transcription factor MYB3R-3 transcription factor MYB3R-2 transcription factor MYB3R-2 transcription factor MYB3R-2-like transcription factor MYB3R-2-like transcription factor MYB3R-3 transcription factor MYB3R-3 transcription factor MYB3R-3-like transcription factor MYB3R-2 uncharacterized LOC102603790 transcription factor MYB3R-5 transcription factor MYB3R-2 transcription factor MYB3R-2 transcription factor MYB3R-3 transcription factor MYB3R-3-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04016 MAPK signaling pathway - plant 2
bra04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03050 Proteasome 3
tae03040 Spliceosome 3
tae03013 Nucleocytoplasmic transport 3
tae03015 mRNA surveillance pathway 3
tae00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04136 Autophagy - other 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00562 Inositol phosphate metabolism 2
ghi04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00562 Inositol phosphate metabolism 2
ghi04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03440 Homologous recombination 2
bdi03460 Fanconi anemia pathway 2
bdi04814 Motor proteins 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 831802 820094 778081 101248605 4339005 4327399 100382779 100285081 103847460 100256181 7454926 11415521 123062547 123058964 123445524 123444927 107889689 107891053 125580389 8057783 102603790 102616986 100843050 100843336 107820060 107797363
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