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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100777440   increased DNA methylation 1 
 gma-r.7   100777440   increased DNA methylation 1 
 gma-m.5   100777440   increased DNA methylation 1 
 gma-u.5   100795889   increased DNA methylation 1 
 mtr-u.5   25487250   increased DNA methylation 1 
 ppo-u.5   18095506   increased DNA methylation 1 
 ath-u.5   ROS4   Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein 
 vvi-u.5   100248637   increased DNA methylation 1 
 sly-u.5   101265659   increased DNA methylation 1 
 osa-u.5   4337507   increased DNA methylation 1 
 zma-u.5   103642225   Increased DNA methylation 1 

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Top 50 coexpressed genes to 100777440 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100777440 (gma-u.5 coexpression data)

CoexMap"100777440"


gmaLOC100777440 | Entrez gene ID : 100777440      
Species gma mtr ppo ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 4 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006357 [list] [network] regulation of transcription by RNA polymerase II  (844 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (5531 genes)  IEA  
GO MF
GO:0016747 [list] [network] acyltransferase activity, transferring groups other than amino-acyl groups  (560 genes)  IEA  
GO:0140110 [list] [network] transcription regulator activity  (2545 genes)  IEA  
Protein XP_003539616.1 [sequence] [blastp]
XP_006592927.1 [sequence] [blastp]
XP_006592928.1 [sequence] [blastp]
XP_006592929.1 [sequence] [blastp]
XP_006592930.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for XP_003539616.1)
nucl 10  (predict for XP_006592927.1)
nucl 10  (predict for XP_006592928.1)
nucl 10  (predict for XP_006592929.1)
nucl 10  (predict for XP_006592930.1)
Subcellular
localization
TargetP
other 8,  chlo 3  (predict for XP_003539616.1)
other 8,  chlo 3  (predict for XP_006592927.1)
other 8,  chlo 3  (predict for XP_006592928.1)
other 8,  chlo 3  (predict for XP_006592929.1)
other 8,  chlo 3  (predict for XP_006592930.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100777440

.
gma-r.7
for
100777440

.
gma-m.5
for
100777440

.
gma-u.5
for
100795889

.
mtr-u.5
for
25487250

.
ppo-u.5
for
18095506

.
ath-u.5
for
ROS4

.
vvi-u.5
for
100248637

.
sly-u.5
for
101265659

.
osa-u.5
for
4337507

.
zma-u.5
for
103642225

.


Ortholog ID: 8458
Species ath gma gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol ROS4 LOC100777440 LOC100795889 LOC101265659 LOC4337507 LOC103642225 LOC103869966 LOC100248637 LOC18095506 LOC25487250 LOC123055408 LOC123047599 LOC123428551 LOC107920662 LOC107935657 LOC106423565 LOC106401344 LOC8064298 LOC102603955 LOC102626084 LOC100839049 LOC107782448 LOC107809224
Function* Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein increased DNA methylation 1 increased DNA methylation 1 increased DNA methylation 1 increased DNA methylation 1 Increased DNA methylation 1 increased DNA methylation 1 increased DNA methylation 1 increased DNA methylation 1 increased DNA methylation 1 uncharacterized LOC123055408 uncharacterized LOC123047599 increased DNA methylation 1-like increased DNA methylation 1 increased DNA methylation 1 increased DNA methylation 1-like increased DNA methylation 1 increased DNA methylation 1 increased DNA methylation 1 increased DNA methylation 1 uncharacterized LOC100839049 increased DNA methylation 1 increased DNA methylation 1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03013 Nucleocytoplasmic transport 4
gma03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03083 Polycomb repressive complex 2
gma03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00340 Histidine metabolism 2
ghi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03440 Homologous recombination 2
bna03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03440 Homologous recombination 2
bna03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04120 Ubiquitin mediated proteolysis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03013 Nucleocytoplasmic transport 2
cit03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03082 ATP-dependent chromatin remodeling 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 820727 100777440 100795889 101265659 4337507 103642225 103869966 100248637 18095506 25487250 123055408 123047599 123428551 107920662 107935657 106423565 106401344 8064298 102603955 102626084 100839049 107782448 107809224
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