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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100778665   RNA helicase aquarius 
 gma-r.7   100778665   RNA helicase aquarius 
 gma-m.5   100778665   RNA helicase aquarius 
 gma-u.5   100807042   RNA helicase aquarius 
 mtr-u.5   25482853   RNA helicase aquarius 
 ppo-u.5   7460223   uncharacterized LOC7460223 
 ath-u.5   EMB2765   P-loop containing nucleoside triphosphate hydrolases superfamily protein 
 vvi-u.5   100260373   uncharacterized LOC100260373 
 vvi-u.5   100243162   uncharacterized LOC100243162 
 sly-u.5   101244224   uncharacterized LOC101244224 
 osa-u.5   4332999   uncharacterized LOC4332999 
 zma-u.5   103635888   RNA helicase aquarius 

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Top 50 coexpressed genes to 100778665 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100778665 (gma-u.5 coexpression data)

CoexMap"100778665"


gmaLOC100778665 | Entrez gene ID : 100778665      
Species gma mtr ppo ath vvi sly osa zma hvu sot tae nta bra cit ghi bna bdi sbi cre
Paralog 4 1 1 1 2 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG gmx03040 [list] [network] Spliceosome (466 genes)
GO BP
GO:0000398 [list] [network] mRNA splicing, via spliceosome  (282 genes)  IEA  
GO CC
GO:0071013 [list] [network] catalytic step 2 spliceosome  (102 genes)  IEA  
GO MF
GO:0004386 [list] [network] helicase activity  (233 genes)  IEA  
GO:0003729 [list] [network] mRNA binding  (563 genes)  IEA  
Protein XP_003555174.1 [sequence] [blastp]
XP_040869023.1 [sequence] [blastp]
XP_040869024.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 9,  chlo 1,  cysk 1  (predict for XP_003555174.1)
cyto 9,  chlo 1,  cysk 1  (predict for XP_040869023.1)
cyto 9,  nucl 1,  mito 1  (predict for XP_040869024.1)
Subcellular
localization
TargetP
mito 6,  other 4  (predict for XP_003555174.1)
mito 6,  other 4  (predict for XP_040869023.1)
mito 7,  other 5  (predict for XP_040869024.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100778665

.
gma-r.7
for
100778665

.
gma-m.5
for
100778665

.
gma-u.5
for
100807042

.
mtr-u.5
for
25482853

.
ppo-u.5
for
7460223

.
ath-u.5
for
EMB2765

.
vvi-u.5
for
100260373

.
vvi-u.5
for
100243162

.
sly-u.5
for
101244224

.
osa-u.5
for
4332999

.
zma-u.5
for
103635888

.


Ortholog ID: 8910
Species ath gma gma sly osa zma bra vvi vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol EMB2765 LOC100807042 LOC100778665 LOC101244224 LOC4332999 LOC103635888 LOC103867082 LOC100260373 LOC100243162 LOC7460223 LOC25482853 LOC123085945 LOC123097287 LOC123448474 LOC107928342 LOC107909088 LOC106410365 LOC106453413 CHLRE_06g300750v5 LOC8077122 LOC102599903 LOC102622876 LOC100828122 LOC107815634 LOC107775465
Function* P-loop containing nucleoside triphosphate hydrolases superfamily protein RNA helicase aquarius RNA helicase aquarius uncharacterized LOC101244224 uncharacterized LOC4332999 RNA helicase aquarius RNA helicase aquarius uncharacterized LOC100260373 uncharacterized LOC100243162 uncharacterized LOC7460223 RNA helicase aquarius RNA helicase aquarius RNA helicase aquarius RNA helicase aquarius RNA helicase aquarius RNA helicase aquarius RNA helicase aquarius-like RNA helicase aquarius-like uncharacterized protein intron-binding protein aquarius intron-binding protein aquarius uncharacterized LOC102622876 intron-binding protein aquarius uncharacterized LOC107815634 uncharacterized LOC107775465
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03013 Nucleocytoplasmic transport 5
ath03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 6
gma03020 RNA polymerase 2
gma03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 4
osa03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 6
zma04120 Ubiquitin mediated proteolysis 3
zma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03013 Nucleocytoplasmic transport 7
bra03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 4
vvi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 3
vvi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 5
ppo03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 2
mtr03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 7
tae03040 Spliceosome 4
tae03440 Homologous recombination 2
tae03450 Non-homologous end-joining 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 5
tae03040 Spliceosome 4
tae03020 RNA polymerase 2
tae03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 2
hvu03013 Nucleocytoplasmic transport 2
hvu03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 4
ghi03420 Nucleotide excision repair 3
ghi03020 RNA polymerase 2
ghi03040 Spliceosome 2
ghi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 4
ghi03420 Nucleotide excision repair 3
ghi03020 RNA polymerase 2
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 10
bna03018 RNA degradation 2
bna03030 DNA replication 2
bna03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 8
bna03013 Nucleocytoplasmic transport 4
bna03018 RNA degradation 2
bna03030 DNA replication 2
bna03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03013 Nucleocytoplasmic transport 4
sbi03040 Spliceosome 3
sbi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 3
cit04120 Ubiquitin mediated proteolysis 2
cit03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 3
nta03018 RNA degradation 2
nta04142 Lysosome 2
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 4
nta03040 Spliceosome 4
nta03018 RNA degradation 2
nta03020 RNA polymerase 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 818459 100807042 100778665 101244224 4332999 103635888 103867082 100260373 100243162 7460223 25482853 123085945 123097287 123448474 107928342 107909088 106410365 106453413 5716974 8077122 102599903 102622876 100828122 107815634 107775465
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