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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100783779   pentatricopeptide repeat-containing protein At5g39680 
 mtr-u.5   11422995   pentatricopeptide repeat-containing protein At5g39680 
 vvi-u.5   100242188   pentatricopeptide repeat-containing protein At5g39680 
 sly-u.5   101256942   pentatricopeptide repeat-containing protein At5g39680 
 osa-u.5   4339672   pentatricopeptide repeat-containing protein At5g39680 
 zma-u.5   103630757   pentatricopeptide repeat-containing protein At5g39680 

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Top 50 coexpressed genes to 100783779 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100783779 (gma-u.5 coexpression data)

CoexMap"100779775"


gmaLOC100779775 | Entrez gene ID : 100779775      
Species gma mtr vvi sly osa zma ppo hvu sot tae nta bra cit ghi bna bdi ath sbi cre
Paralog 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (407 genes)  IEA  
GO CC
GO:0043231 [list] [network] intracellular membrane-bounded organelle  (10455 genes)  IEA  
GO MF
GO:0008270 [list] [network] zinc ion binding  (1182 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (2019 genes)  IEA  
GO:0005515 [list] [network] protein binding  (7243 genes)  IEA  
Protein XP_003543853.1 [sequence] [blastp]
XP_006593678.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9  (predict for XP_003543853.1)
chlo 9  (predict for XP_006593678.1)
Subcellular
localization
TargetP
mito 3,  other 3  (predict for XP_003543853.1)
mito 4,  other 3  (predict for XP_006593678.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100783779

.
mtr-u.5
for
11422995

.
vvi-u.5
for
100242188

.
sly-u.5
for
101256942

.
osa-u.5
for
4339672

.
zma-u.5
for
103630757

.


Ortholog ID: 9705
Species gma sly osa zma bra bra vvi mtr hvu ghi sot cit bdi nta nta
Symbol LOC100783779 LOC101256942 LOC4339672 LOC103630757 LOC103864216 LOC103850148 LOC100242188 LOC11422995 LOC123451170 LOC107911811 LOC102588774 LOC102617103 LOC100845678 LOC107819294 LOC107793836
Function* pentatricopeptide repeat-containing protein At5g39680 pentatricopeptide repeat-containing protein At5g39680 pentatricopeptide repeat-containing protein At5g39680 pentatricopeptide repeat-containing protein At5g39680 pentatricopeptide repeat-containing protein At5g39680-like pentatricopeptide repeat-containing protein At5g39680 pentatricopeptide repeat-containing protein At5g39680 pentatricopeptide repeat-containing protein At5g39680 pentatricopeptide repeat-containing protein At5g39680-like pentatricopeptide repeat-containing protein At5g39680 pentatricopeptide repeat-containing protein At5g39680 pentatricopeptide repeat-containing protein At5g39680 pentatricopeptide repeat-containing protein At5g39680 pentatricopeptide repeat-containing protein At5g39680 pentatricopeptide repeat-containing protein At5g39680
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03030 DNA replication 3
hvu03008 Ribosome biogenesis in eukaryotes 2
hvu03410 Base excision repair 2
hvu03420 Nucleotide excision repair 2
hvu03430 Mismatch repair 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100783779 101256942 4339672 103630757 103864216 103850148 100242188 11422995 123451170 107911811 102588774 102617103 100845678 107819294 107793836
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