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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100779821   pentatricopeptide repeat-containing protein At5g39350 
 gma-r.7   100779821   pentatricopeptide repeat-containing protein At5g39350 
 mtr-u.5   25485607   pentatricopeptide repeat-containing protein At5g39350 
 ppo-u.5   7472612   pentatricopeptide repeat-containing protein At5g39350 
 ath-u.5   AT5G39350   Tetratricopeptide repeat (TPR)-like superfamily protein 
 bra-r.6   103863834   pentatricopeptide repeat-containing protein At5g39350 
 vvi-u.5   100260999   pentatricopeptide repeat-containing protein At5g39350 
 ghi-r.1   107923104   pentatricopeptide repeat-containing protein At5g39350 
 ghi-r.1   107911828   pentatricopeptide repeat-containing protein At5g39350 
 bna-r.1   106445953   pentatricopeptide repeat-containing protein At5g39350 
 bna-r.1   106426569   pentatricopeptide repeat-containing protein At5g39350 
 cit-r.1   102615155   pentatricopeptide repeat-containing protein At5g39350 
 sly-u.5   101264889   pentatricopeptide repeat-containing protein At5g39350 
 sot-r.1   102591269   pentatricopeptide repeat-containing protein At5g39350 
 nta-r.1   107777395   pentatricopeptide repeat-containing protein At5g39350-like 
 nta-r.1   107771268   pentatricopeptide repeat-containing protein At5g39350-like 
 osa-u.5   107278606   pentatricopeptide repeat-containing protein At5g39350 

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Top 50 coexpressed genes to 100779821 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100779821 (gma-u.5 coexpression data)

CoexMap"100779821"


gmaLOC100779821 | Entrez gene ID : 100779821      
Species gma mtr ppo ath bra vvi ghi bna cit sly sot nta osa bdi tae zma cre sbi hvu
Paralog 2 1 1 1 1 1 2 2 1 1 1 2 1 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (407 genes)  IEA  
GO CC
GO:0043231 [list] [network] intracellular membrane-bounded organelle  (10455 genes)  IEA  
GO MF
GO:0003723 [list] [network] RNA binding  (2019 genes)  IEA  
GO:0005515 [list] [network] protein binding  (7243 genes)  IEA  
Protein XP_003516575.1 [sequence] [blastp]
XP_006573586.1 [sequence] [blastp]
XP_006573587.1 [sequence] [blastp]
XP_014631427.1 [sequence] [blastp]
XP_014631432.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  cyto 1,  mito 1  (predict for XP_003516575.1)
chlo 9,  cyto 1,  mito 1  (predict for XP_006573586.1)
chlo 9,  cyto 1,  mito 1  (predict for XP_006573587.1)
chlo 9,  cyto 1,  mito 1  (predict for XP_014631427.1)
chlo 9,  cyto 1,  mito 1  (predict for XP_014631432.1)
Subcellular
localization
TargetP
other 3  (predict for XP_003516575.1)
other 3  (predict for XP_006573586.1)
other 3  (predict for XP_006573587.1)
other 3  (predict for XP_014631427.1)
other 3  (predict for XP_014631432.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100779821
gma-r.7
for
100779821
mtr-u.5
for
25485607
ppo-u.5
for
7472612
ath-u.5
for
AT5G39350
bra-r.6
for
103863834
vvi-u.5
for
100260999
ghi-r.1
for
107923104
ghi-r.1
for
107911828
bna-r.1
for
106445953
bna-r.1
for
106426569
cit-r.1
for
102615155
sly-u.5
for
101264889
sot-r.1
for
102591269
nta-r.1
for
107777395
nta-r.1
for
107771268
osa-u.5
for
107278606


Ortholog ID: 11427
Species gma mtr ppo ath bra vvi ghi ghi bna bna cit sly sot nta nta osa
Symbol LOC100779821 LOC25485607 LOC7472612 AT5G39350 LOC103863834 LOC100260999 LOC107923104 LOC107911828 LOC106445953 LOC106426569 LOC102615155 LOC101264889 LOC102591269 LOC107777395 LOC107771268 LOC107278606
Function* pentatricopeptide repeat-containing protein At5g39350 pentatricopeptide repeat-containing protein At5g39350 pentatricopeptide repeat-containing protein At5g39350 Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At5g39350 pentatricopeptide repeat-containing protein At5g39350 pentatricopeptide repeat-containing protein At5g39350 pentatricopeptide repeat-containing protein At5g39350 pentatricopeptide repeat-containing protein At5g39350 pentatricopeptide repeat-containing protein At5g39350 pentatricopeptide repeat-containing protein At5g39350 pentatricopeptide repeat-containing protein At5g39350 pentatricopeptide repeat-containing protein At5g39350 pentatricopeptide repeat-containing protein At5g39350-like pentatricopeptide repeat-containing protein At5g39350-like pentatricopeptide repeat-containing protein At5g39350
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100779821 25485607 7472612 833931 103863834 100260999 107923104 107911828 106445953 106426569 102615155 101264889 102591269 107777395 107771268 107278606
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