ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
gma-u.5	100779894	uncharacterized LOC100779894
gma-r.7	100779894	uncharacterized LOC100779894
gma-u.5	100799543	uncharacterized LOC100799543
gma-u.5	100820116	uncharacterized LOC100820116
gma-u.5	100815819	uncharacterized LOC100815819
mtr-u.5	11436546	uncharacterized LOC11436546
mtr-u.5	25493757	uncharacterized LOC25493757
ppo-u.5	7460775	uncharacterized LOC7460775
ppo-u.5	7495190	uncharacterized LOC7495190
ppo-u.5	7460489	uncharacterized LOC7460489
ath-u.5	AT3G27770	plant/protein
ath-u.5	AT5G62960	UDP-N-acetylglucosamine-N-acetylmuramyl-pyrophosphoryl-undecaprenol N-acetylglucosamine protein
bra-r.6	103852656	uncharacterized LOC103852656
bra-r.6	103854216	uncharacterized LOC103854216
vvi-u.5	100253796	uncharacterized LOC100253796
vvi-u.5	100247330	uncharacterized LOC100247330
vvi-u.5	100245004	uncharacterized LOC100245004
ghi-r.1	107897153	uncharacterized LOC107897153
ghi-r.1	107946026	uncharacterized LOC107946026
bna-r.1	106402708	uncharacterized LOC106402708
cit-r.1	102626320	uncharacterized LOC102626320
cit-r.1	102621078	uncharacterized LOC102621078
sly-u.5	101249270	uncharacterized LOC101249270
sly-u.5	101250307	uncharacterized LOC101250307
sly-u.5	101253575	uncharacterized LOC101253575
sot-r.1	102598133	uncharacterized LOC102598133
sot-r.1	102592038	uncharacterized LOC102592038
nta-r.1	142171483	uncharacterized LOC142171483
osa-u.5	4344161	uncharacterized LOC4344161
osa-u.5	4328191	uncharacterized LOC4328191
zma-u.5	100277400	uncharacterized LOC100277400
zma-u.5	100277315	uncharacterized LOC100277315
zma-u.5	103626567	uncharacterized LOC103626567
tae-r.2	123051753	uncharacterized LOC123051753
tae-r.2	123043882	uncharacterized LOC123043882
tae-r.2	123132033	uncharacterized LOC123132033
hvu-r.1	123403781	uncharacterized LOC123403781
hvu-r.1	123425438	uncharacterized LOC123425438
sbi-r.1	8069921	uncharacterized LOC8069921
sbi-r.1	8072242	uncharacterized LOC8072242
sbi-r.1	8078481	uncharacterized LOC8078481
bdi-r.1	100846204	uncharacterized LOC100846204
bdi-r.1	100829367	uncharacterized LOC100829367
cre-r.1	CHLRE_03g159700v5	uncharacterized protein

Top 50 coexpressed genes to 100779894 (gma-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 100779894 (gma-u.5 coexpression data)

CoexMap"100779894"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO:0016020 [list] [network] membrane

(5894 genes)

IEA

GO MF

Protein

XP_003553677.1 [sequence] [blastp]
XP_040868671.1 [sequence] [blastp]

Subcellular
localization
wolf

plas 4, E.R. 3, vacu 1, cyto 1, extr 1	(predict for XP_003553677.1)
plas 4, vacu 2, E.R. 2, golg_plas 2, E.R._vacu 2, cyto_plas 2	(predict for XP_040868671.1)

Subcellular
localization
TargetP

scret 9	(predict for XP_003553677.1)
scret 9	(predict for XP_040868671.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	gma-u.5 for 100779894	gma-r.7 for 100779894	gma-u.5 for 100799543	gma-u.5 for 100820116	gma-u.5 for 100815819	mtr-u.5 for 11436546	mtr-u.5 for 25493757	ppo-u.5 for 7460775	ppo-u.5 for 7495190	ppo-u.5 for 7460489	ath-u.5 for AT3G27770	ath-u.5 for AT5G62960	bra-r.6 for 103852656	bra-r.6 for 103854216	vvi-u.5 for 100253796	vvi-u.5 for 100247330	vvi-u.5 for 100245004	ghi-r.1 for 107897153	ghi-r.1 for 107946026	bna-r.1 for 106402708	cit-r.1 for 102626320	cit-r.1 for 102621078	sly-u.5 for 101249270	sly-u.5 for 101250307	sly-u.5 for 101253575	sot-r.1 for 102598133	sot-r.1 for 102592038	nta-r.1 for 142171483	osa-u.5 for 4344161	osa-u.5 for 4328191	zma-u.5 for 100277400	zma-u.5 for 100277315	zma-u.5 for 103626567	tae-r.2 for 123051753	tae-r.2 for 123043882	tae-r.2 for 123132033	hvu-r.1 for 123403781	hvu-r.1 for 123425438	sbi-r.1 for 8069921	sbi-r.1 for 8072242	sbi-r.1 for 8078481	bdi-r.1 for 100846204	bdi-r.1 for 100829367	cre-r.1 for CHLRE_03g159700v5

Ortholog

Ortholog ID: 492

Species

gma

mtr

ppo

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

uncharacterized LOC100799543

uncharacterized LOC100799510

uncharacterized LOC100781639

uncharacterized LOC11436546

uncharacterized LOC11416585

uncharacterized LOC25501487

uncharacterized LOC7495190

uncharacterized LOC7460489

uncharacterized LOC7496833

UDP-N-acetylglucosamine-N-acetylmuramyl-pyrophosphoryl-undecaprenol N-acetylglucosamine protein

uncharacterized protein

uncharacterized LOC103871849

uncharacterized LOC100247330

uncharacterized LOC100245004

uncharacterized LOC100244799

uncharacterized LOC107892236

uncharacterized LOC107960337

uncharacterized LOC107922691

uncharacterized LOC106397761

uncharacterized BNAC02G37080D

ATP-citrate synthase alpha chain protein 1

uncharacterized LOC102626320

uncharacterized LOC102621078

uncharacterized LOC102624309

uncharacterized LOC101250307

uncharacterized LOC101260302

uncharacterized LOC101264013

uncharacterized LOC102592038

uncharacterized LOC102601267

uncharacterized LOC107802398

uncharacterized LOC107821592

uncharacterized LOC4344161

uncharacterized LOC4327642

uncharacterized LOC100277400

uncharacterized LOC100277315

uncharacterized LOC103626567

uncharacterized LOC123043882

uncharacterized LOC123060253

uncharacterized LOC123142438

uncharacterized LOC123403781

uncharacterized LOC123442791

uncharacterized LOC8069921

uncharacterized LOC8072242

uncharacterized LOC8078481

uncharacterized LOC100846204

uncharacterized LOC100836266

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04144	Endocytosis	4
mtr03250	Viral life cycle - HIV-1	2
mtr03272	Virion - Hepatitis viruses	2
mtr04145	Phagosome	2
mtr04148	Efferocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00900	Terpenoid backbone biosynthesis	4
mtr03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00190	Oxidative phosphorylation	4
ppo00020	Citrate cycle (TCA cycle)	2
ppo00270	Cysteine and methionine metabolism	2
ppo00566	Sulfoquinovose metabolism	2
ppo00620	Pyruvate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00562	Inositol phosphate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00970	Aminoacyl-tRNA biosynthesis	2
bra00300	Lysine biosynthesis	2
bra01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00564	Glycerophospholipid metabolism	3
vvi00561	Glycerolipid metabolism	2
vvi04070	Phosphatidylinositol signaling system	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04136	Autophagy - other	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00770	Pantothenate and CoA biosynthesis	4
ghi01240	Biosynthesis of cofactors	4
ghi00010	Glycolysis / Gluconeogenesis	2
ghi00053	Ascorbate and aldarate metabolism	2
ghi00071	Fatty acid degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00770	Pantothenate and CoA biosynthesis	4
ghi01240	Biosynthesis of cofactors	4
ghi00010	Glycolysis / Gluconeogenesis	2
ghi00053	Ascorbate and aldarate metabolism	2
ghi00071	Fatty acid degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03015	mRNA surveillance pathway	3
bna04382	Cornified envelope formation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00020	Citrate cycle (TCA cycle)	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04141	Protein processing in endoplasmic reticulum	2
sly04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04016	MAPK signaling pathway - plant	7
sly04075	Plant hormone signal transduction	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03050	Proteasome	5
sot04626	Plant-pathogen interaction	3
sot00190	Oxidative phosphorylation	2
sot04145	Phagosome	2
sot04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03022	Basal transcription factors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00562	Inositol phosphate metabolism	2
nta00564	Glycerophospholipid metabolism	2
nta00565	Ether lipid metabolism	2
nta04142	Lysosome	2
nta04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04144	Endocytosis	2
osa04130	SNARE interactions in vesicular transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00500	Starch and sucrose metabolism	2
osa00900	Terpenoid backbone biosynthesis	2
osa00350	Tyrosine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma01240	Biosynthesis of cofactors	4
zma00710	Carbon fixation by Calvin cycle	4
zma01200	Carbon metabolism	4
zma00030	Pentose phosphate pathway	3
zma01230	Biosynthesis of amino acids	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00563	Glycosylphosphatidylinositol (GPI)-anchor biosynthesis	2
zma00010	Glycolysis / Gluconeogenesis	2
zma00051	Fructose and mannose metabolism	2
zma00562	Inositol phosphate metabolism	2
zma00710	Carbon fixation by Calvin cycle	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00480	Glutathione metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00592	alpha-Linolenic acid metabolism	3
tae00030	Pentose phosphate pathway	3
tae00710	Carbon fixation by Calvin cycle	3
tae01200	Carbon metabolism	3
tae01230	Biosynthesis of amino acids	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00190	Oxidative phosphorylation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi01240	Biosynthesis of cofactors	2
sbi00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00561	Glycerolipid metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00561	Glycerolipid metabolism	2
bdi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre00071	Fatty acid degradation	7
cre01212	Fatty acid metabolism	7
cre04146	Peroxisome	7
cre00592	alpha-Linolenic acid metabolism	7
cre01200	Carbon metabolism	6

Expression

Expression pattern

Entrez Gene ID^*

100799543

100799510

100781639

11436546

11416585

25501487

7495190

7460489

7496833

836416

843387

103871849

100247330

100245004

100244799

107892236

107960337

107922691

106397761

106382141

106362424

102626320

102621078

102624309

101250307

101260302

101264013

102592038

102601267

107802398

107821592

4344161

4327642

100277400

100277315

103626567

123043882

123060253

123142438

123403781

123442791

8069921

8072242

8078481

100846204

100836266

5723003

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Species	gma	mtr	ppo	ath	bra	vvi	ghi	bna	cit	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	5	2	3	2	2	3	2	1	2	3	2	1	2	3	3	2	3	2	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100779894 (gma-u.5 coexpression data)

Top 50 enrichment test to 100779894 (gma-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**