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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   PAP1   production of anthocyanin pigment 1 
 bra-r.6   MYB3   transcription factor MYB114-like 
 vvi-u.5   100233098   transcription factor MYB1 
 vvi-u.5   100232838   transcription factor MYB90 
 vvi-u.5   MYBA6   R2R3 MYB transcription factor 
 ghi-r.1   107892994   transcription factor MYB113-like 
 ghi-r.1   107893819   transcription factor MYB114 
 bna-r.1   106440625   transcription factor MYB114-like 
 cit-r.1   102624703   transcription factor MYB114-like 
 sly-u.5   MYB75   transcription factor MYB75 
 sot-r.1   AN1   transcription factor R2R3-MYB 
 sot-r.1   102578889   transcription factor MYB113-like 
 sot-r.1   102590860   transcription factor MYB113 

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Top 50 coexpressed genes to PAP1 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to PAP1 (ath-u.5 coexpression data)

CoexMap"100780023"


gmaR | Entrez gene ID : 100780023      
Species ath bra vvi ghi bna cit sly sot bdi nta osa tae ppo zma cre mtr sbi gma hvu
Paralog 1 1 3 2 1 1 1 3 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
Protein NP_001357196.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  cyto 3,  cysk_nucl 3,  nucl_plas 3  (predict for NP_001357196.1)
Subcellular
localization
TargetP
other 9  (predict for NP_001357196.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ath-u.5
for
PAP1
bra-r.6
for
MYB3
vvi-u.5
for
100233098
vvi-u.5
for
100232838
vvi-u.5
for
MYBA6
ghi-r.1
for
107892994
ghi-r.1
for
107893819
bna-r.1
for
106440625
cit-r.1
for
102624703
sly-u.5
for
MYB75
sot-r.1
for
AN1
sot-r.1
for
102578889
sot-r.1
for
102590860


Ortholog ID: 1822
Species ath bra vvi ghi ghi cit sly sot sot sot
Symbol PAP1 MYB3 MYBA6 LOC107892994 LOC107961901 LOC102624703 MYB75 AN1 LOC102590860 LOC102585603
Function* production of anthocyanin pigment 1 transcription factor MYB114-like R2R3 MYB transcription factor transcription factor MYB113-like transcription factor MYB113-like transcription factor MYB114-like transcription factor MYB75 transcription factor R2R3-MYB transcription factor MYB113 transcription factor MYB90-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00942 Anthocyanin biosynthesis 2
ath00941 Flavonoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04712 Circadian rhythm - plant 3
vvi04120 Ubiquitin mediated proteolysis 2
vvi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00040 Pentose and glucuronate interconversions 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00040 Pentose and glucuronate interconversions 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00941 Flavonoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00941 Flavonoid biosynthesis 4
sly00944 Flavone and flavonol biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00941 Flavonoid biosynthesis 8
sot00944 Flavone and flavonol biosynthesis 3
sot04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00941 Flavonoid biosynthesis 7
sot04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00941 Flavonoid biosynthesis 8
sot04712 Circadian rhythm - plant 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 842120 103852326 100243253 107892994 107961901 102624703 101247276 102577602 102590860 102585603
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