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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100780322   pentatricopeptide repeat-containing protein At1g71210, mitochondrial 
 gma-r.7   100780322   pentatricopeptide repeat-containing protein At1g71210, mitochondrial 
 gma-u.5   100814270   pentatricopeptide repeat-containing protein At1g71210, mitochondrial 
 mtr-u.5   11425742   pentatricopeptide repeat-containing protein At1g71210, mitochondrial 
 mtr-u.5   11424557   pentatricopeptide repeat-containing protein At1g71210, mitochondrial 
 ppo-u.5   18098369   pentatricopeptide repeat-containing protein At1g71210, mitochondrial 
 ath-u.5   AT1G71210   Pentatricopeptide repeat (PPR) superfamily protein 
 vvi-u.5   100246847   pentatricopeptide repeat-containing protein At1g71210, mitochondrial 
 sly-u.5   101264345   pentatricopeptide repeat-containing protein At1g71210, mitochondrial 
 osa-u.5   4328167   pentatricopeptide repeat-containing protein At1g71210, mitochondrial 
 zma-u.5   100381630   uncharacterized LOC100381630 

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Top 50 coexpressed genes to 100780322 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100780322 (gma-u.5 coexpression data)

CoexMap"100780322"


gmaLOC100780322 | Entrez gene ID : 100780322      
Species gma mtr ppo ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 3 2 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (7243 genes)  IEA  
Protein XP_006595790.1 [sequence] [blastp]
XP_006595792.1 [sequence] [blastp]
XP_025981265.1 [sequence] [blastp]
XP_040865157.1 [sequence] [blastp]
XP_040865158.1 [sequence] [blastp]
XP_040865159.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 5,  cyto_mito 3,  chlo 2,  nucl 1  (predict for XP_006595790.1)
mito 5,  cyto_mito 3,  chlo 2,  nucl 1  (predict for XP_006595792.1)
mito 5,  cyto_mito 3,  chlo 2,  nucl 1  (predict for XP_025981265.1)
mito 5,  cyto_mito 3,  chlo 2,  nucl 1  (predict for XP_040865157.1)
mito 5,  cyto_mito 3,  chlo 2,  nucl 1  (predict for XP_040865158.1)
mito 5,  cyto_mito 3,  chlo 2,  nucl 1  (predict for XP_040865159.1)
Subcellular
localization
TargetP
mito 4  (predict for XP_006595790.1)
mito 4  (predict for XP_006595792.1)
mito 4  (predict for XP_025981265.1)
mito 4  (predict for XP_040865157.1)
mito 4  (predict for XP_040865158.1)
mito 4  (predict for XP_040865159.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100780322

.
gma-r.7
for
100780322

.
gma-u.5
for
100814270

.
mtr-u.5
for
11425742

.
mtr-u.5
for
11424557

.
ppo-u.5
for
18098369

.
ath-u.5
for
AT1G71210

.
vvi-u.5
for
100246847

.
sly-u.5
for
101264345

.
osa-u.5
for
4328167

.
zma-u.5
for
100381630

.


Ortholog ID: 8765
Species ath gma gma sly osa zma bra vvi ppo mtr mtr tae tae hvu ghi ghi bna bna sbi sot cit bdi nta
Symbol AT1G71210 LOC100780322 LOC100814270 LOC101264345 LOC4328167 LOC100381630 LOC103831648 LOC100246847 LOC18098369 LOC11424557 LOC11425742 LOC123136000 LOC123132011 LOC123404011 LOC107957030 LOC107951950 LOC106406406 LOC125588550 LOC8068284 LOC102582591 LOC102609082 LOC100844090 LOC107778831
Function* Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At1g71210, mitochondrial pentatricopeptide repeat-containing protein At1g71210, mitochondrial pentatricopeptide repeat-containing protein At1g71210, mitochondrial pentatricopeptide repeat-containing protein At1g71210, mitochondrial uncharacterized LOC100381630 pentatricopeptide repeat-containing protein At1g71210, mitochondrial pentatricopeptide repeat-containing protein At1g71210, mitochondrial pentatricopeptide repeat-containing protein At1g71210, mitochondrial pentatricopeptide repeat-containing protein At1g71210, mitochondrial pentatricopeptide repeat-containing protein At1g71210, mitochondrial pentatricopeptide repeat-containing protein At1g71210, mitochondrial pentatricopeptide repeat-containing protein At1g71210, mitochondrial pentatricopeptide repeat-containing protein At1g71210, mitochondrial pentatricopeptide repeat-containing protein At1g71210, mitochondrial pentatricopeptide repeat-containing protein At1g71210, mitochondrial pentatricopeptide repeat-containing protein At1g71210, mitochondrial pentatricopeptide repeat-containing protein At1g71210, mitochondrial-like pentatricopeptide repeat-containing protein At1g71210 pentatricopeptide repeat-containing protein At1g71210 pentatricopeptide repeat-containing protein At1g71210, mitochondrial pentatricopeptide repeat-containing protein At1g71210, mitochondrial pentatricopeptide repeat-containing protein At1g71210, mitochondrial-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
sly04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 6
vvi03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00220 Arginine biosynthesis 6
tae01210 2-Oxocarboxylic acid metabolism 3
tae01230 Biosynthesis of amino acids 3
tae00240 Pyrimidine metabolism 3
tae00250 Alanine, aspartate and glutamate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00240 Pyrimidine metabolism 8
tae01240 Biosynthesis of cofactors 8
tae00220 Arginine biosynthesis 6
tae00250 Alanine, aspartate and glutamate metabolism 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03420 Nucleotide excision repair 2
ghi00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03013 Nucleocytoplasmic transport 2
sbi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00906 Carotenoid biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 843461 100780322 100814270 101264345 4328167 100381630 103831648 100246847 18098369 11424557 11425742 123136000 123132011 123404011 107957030 107951950 106406406 125588550 8068284 102582591 102609082 100844090 107778831
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