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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100780408   pentatricopeptide repeat-containing protein At1g02150 
 gma-r.7   100780408   pentatricopeptide repeat-containing protein At1g02150 
 gma-m.5   100780408   pentatricopeptide repeat-containing protein At1g02150 
 gma-u.5   100777139   pentatricopeptide repeat-containing protein At1g02150 
 mtr-u.5   25500110   pentatricopeptide repeat-containing protein At1g02150 
 ppo-u.5   18105084   pentatricopeptide repeat-containing protein At1g02150 
 ppo-u.5   7453924   pentatricopeptide repeat-containing protein At1g02150 
 ath-u.5   AT1G02150   Tetratricopeptide repeat (TPR)-like superfamily protein 
 vvi-u.5   100259772   pentatricopeptide repeat-containing protein At1g02150 
 sly-u.5   101252524   pentatricopeptide repeat-containing protein At1g02150 
 zma-u.5   100382076   Pentatricopeptide repeat-containing protein 

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Top 50 coexpressed genes to 100780408 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100780408 (gma-u.5 coexpression data)

CoexMap"100780408"


gmaLOC100780408 | Entrez gene ID : 100780408      
Species gma mtr ppo ath vvi sly zma sbi nta bra osa cre cit hvu bdi sot tae bna ghi
Paralog 4 1 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005739 [list] [network] mitochondrion  (1058 genes)  IEA  
GO MF
GO:0005515 [list] [network] protein binding  (7243 genes)  IEA  
Protein XP_003520417.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  nucl 1,  mito 1,  plas 1,  cyto_nucl 1,  cysk_nucl 1,  mito_plas 1  (predict for XP_003520417.1)
Subcellular
localization
TargetP
chlo 8  (predict for XP_003520417.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100780408

.
gma-r.7
for
100780408

.
gma-m.5
for
100780408

.
gma-u.5
for
100777139

.
mtr-u.5
for
25500110

.
ppo-u.5
for
18105084

.
ppo-u.5
for
7453924

.
ath-u.5
for
AT1G02150

.
vvi-u.5
for
100259772

.
sly-u.5
for
101252524

.
zma-u.5
for
100382076

.


Ortholog ID: 12032
Species ath gma gma sly zma bra vvi ppo ppo mtr ghi ghi bna bna sbi sot cit bdi nta nta
Symbol AT1G02150 LOC100780408 LOC100777139 LOC101252524 LOC100382076 LOC103844698 LOC100259772 LOC7453924 LOC18105084 LOC25500110 LOC107915874 LOC107896945 LOC106370824 LOC106400824 LOC8055940 LOC102580180 LOC102622597 LOC100829762 LOC107802714 LOC107784609
Function* Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At1g02150 pentatricopeptide repeat-containing protein At1g02150 pentatricopeptide repeat-containing protein At1g02150 Pentatricopeptide repeat-containing protein pentatricopeptide repeat-containing protein At1g02150 pentatricopeptide repeat-containing protein At1g02150 pentatricopeptide repeat-containing protein At1g02150 pentatricopeptide repeat-containing protein At1g02150 pentatricopeptide repeat-containing protein At1g02150 pentatricopeptide repeat-containing protein At1g02150 pentatricopeptide repeat-containing protein At1g02150 pentatricopeptide repeat-containing protein At1g02150 pentatricopeptide repeat-containing protein At1g02150 pentatricopeptide repeat-containing protein At1g02150 pentatricopeptide repeat-containing protein At1g02150 pentatricopeptide repeat-containing protein At1g02150 uncharacterized LOC100829762 pentatricopeptide repeat-containing protein At1g02150-like pentatricopeptide repeat-containing protein At1g02150
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00561 Glycerolipid metabolism 2
gma00566 Sulfoquinovose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03018 RNA degradation 2
gma04141 Protein processing in endoplasmic reticulum 2
gma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 6
vvi00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04626 Plant-pathogen interaction 10
bna00785 Lipoic acid metabolism 2
bna01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04626 Plant-pathogen interaction 10
bna00785 Lipoic acid metabolism 2
bna01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00220 Arginine biosynthesis 2
cit00250 Alanine, aspartate and glutamate metabolism 2
cit01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 839577 100780408 100777139 101252524 100382076 103844698 100259772 7453924 18105084 25500110 107915874 107896945 106370824 106400824 8055940 102580180 102622597 100829762 107802714 107784609
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