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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100780528   DNA replication complex GINS protein PSF2 
 gma-r.7   100780528   DNA replication complex GINS protein PSF2 
 gma-m.5   100780528   DNA replication complex GINS protein PSF2 
 mtr-u.5   25497860   DNA replication complex GINS protein PSF2 
 ppo-u.5   7458146   DNA replication complex GINS protein PSF2 
 ath-u.5   PSF2   PSF2 
 bra-r.6   103859450   DNA replication complex GINS protein PSF2 
 ghi-r.1   107934367   DNA replication complex GINS protein PSF2 
 ghi-r.1   121222574   DNA replication complex GINS protein PSF2 
 bna-r.1   106353094   DNA replication complex GINS protein PSF2 
 bna-r.1   106399439   DNA replication complex GINS protein PSF2 
 sly-u.5   101265438   DNA replication complex GINS protein PSF2 
 sot-r.1   102583513   DNA replication complex GINS protein PSF2 
 nta-r.1   107822712   DNA replication complex GINS protein PSF2-like 
 nta-r.1   107810098   DNA replication complex GINS protein PSF2 
 osa-u.5   4327215   DNA replication complex GINS protein PSF2 
 zma-u.5   100280623   uncharacterized LOC100280623 
 tae-r.2   123048877   DNA replication complex GINS protein PSF2 
 tae-r.2   123067312   DNA replication complex GINS protein PSF2 
 tae-r.2   123175958   DNA replication complex GINS protein PSF2 
 sbi-r.1   8084318   DNA replication complex GINS protein PSF2 
 sbi-r.1   8084993   DNA replication complex GINS protein PSF2 
 bdi-r.1   100838674   DNA replication complex GINS protein PSF2 
 cre-r.1   CHLRE_01g029100v5   uncharacterized protein 

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Top 50 coexpressed genes to 100780528 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100780528 (gma-u.5 coexpression data)

CoexMap"100780528"


gmaLOC100780528 | Entrez gene ID : 100780528      
Species gma mtr ppo ath bra ghi bna sly sot nta osa zma tae sbi bdi cre hvu vvi cit
Paralog 3 1 1 1 1 2 2 1 1 2 1 1 3 2 1 1 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0000727 [list] [network] double-strand break repair via break-induced replication  (19 genes)  IEA  
GO:0006260 [list] [network] DNA replication  (274 genes)  IEA  
GO CC
GO:0000811 [list] [network] GINS complex  (7 genes)  IEA  
GO:0005634 [list] [network] nucleus  (5531 genes)  IEA  
GO MF
Protein XP_003547654.1 [sequence] [blastp]
XP_006599036.1 [sequence] [blastp]
XP_006599037.1 [sequence] [blastp]
XP_014624501.1 [sequence] [blastp]
XP_040866743.1 [sequence] [blastp]
Subcellular
localization
wolf
cysk 6,  cyto 3,  cysk_plas 3  (predict for XP_003547654.1)
cysk 6,  cyto 3,  cysk_plas 3  (predict for XP_006599036.1)
cysk 6,  cyto 3,  cysk_plas 3  (predict for XP_006599037.1)
cysk 6,  cyto 3,  cysk_plas 3  (predict for XP_014624501.1)
cysk 6,  cyto 3,  cysk_plas 3  (predict for XP_040866743.1)
Subcellular
localization
TargetP
other 8  (predict for XP_003547654.1)
other 8  (predict for XP_006599036.1)
other 8  (predict for XP_006599037.1)
other 8  (predict for XP_014624501.1)
other 8  (predict for XP_040866743.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100780528
gma-r.7
for
100780528
gma-m.5
for
100780528
mtr-u.5
for
25497860
ppo-u.5
for
7458146
ath-u.5
for
PSF2
bra-r.6
for
103859450
ghi-r.1
for
107934367
ghi-r.1
for
121222574
bna-r.1
for
106353094
bna-r.1
for
106399439
sly-u.5
for
101265438
sot-r.1
for
102583513
nta-r.1
for
107822712
nta-r.1
for
107810098
osa-u.5
for
4327215
zma-u.5
for
100280623
tae-r.2
for
123048877
tae-r.2
for
123067312
tae-r.2
for
123175958
sbi-r.1
for
8084318
sbi-r.1
for
8084993
bdi-r.1
for
100838674
cre-r.1
for
CHLRE_01g029100v5


Ortholog ID: 7204
Species gma mtr ppo ath bra ghi ghi bna bna sly sot nta nta osa zma tae tae tae hvu sbi sbi bdi cre
Symbol LOC100780528 LOC25497860 LOC7458146 PSF2 LOC103859450 LOC107934367 LOC121222574 LOC106353094 LOC106399439 LOC101265438 LOC102583513 LOC107822712 LOC107810098 LOC4327215 LOC100280623 LOC123048877 LOC123067312 LOC123175958 LOC123449710 LOC8084318 LOC8084993 LOC100838674 CHLRE_01g029100v5
Function* DNA replication complex GINS protein PSF2 DNA replication complex GINS protein PSF2 DNA replication complex GINS protein PSF2 PSF2 DNA replication complex GINS protein PSF2 DNA replication complex GINS protein PSF2 DNA replication complex GINS protein PSF2 DNA replication complex GINS protein PSF2 DNA replication complex GINS protein PSF2 DNA replication complex GINS protein PSF2 DNA replication complex GINS protein PSF2 DNA replication complex GINS protein PSF2-like DNA replication complex GINS protein PSF2 DNA replication complex GINS protein PSF2 uncharacterized LOC100280623 DNA replication complex GINS protein PSF2 DNA replication complex GINS protein PSF2 DNA replication complex GINS protein PSF2 DNA replication complex GINS protein PSF2 DNA replication complex GINS protein PSF2 DNA replication complex GINS protein PSF2 DNA replication complex GINS protein PSF2 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01240 Biosynthesis of cofactors 5
mtr00770 Pantothenate and CoA biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03030 DNA replication 7
ath03410 Base excision repair 3
ath03420 Nucleotide excision repair 3
ath03430 Mismatch repair 2
ath03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03030 DNA replication 4
bra03082 ATP-dependent chromatin remodeling 3
bra03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00230 Purine metabolism 4
ghi00240 Pyrimidine metabolism 4
ghi00480 Glutathione metabolism 4
ghi01232 Nucleotide metabolism 4
ghi03440 Homologous recombination 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00230 Purine metabolism 4
ghi00240 Pyrimidine metabolism 4
ghi00480 Glutathione metabolism 4
ghi01232 Nucleotide metabolism 4
ghi03440 Homologous recombination 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03082 ATP-dependent chromatin remodeling 4
bna03083 Polycomb repressive complex 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03082 ATP-dependent chromatin remodeling 4
bna03083 Polycomb repressive complex 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03030 DNA replication 7
sly03420 Nucleotide excision repair 4
sly03430 Mismatch repair 2
sly03410 Base excision repair 2
sly03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03030 DNA replication 8
sot03440 Homologous recombination 2
sot03460 Fanconi anemia pathway 2
sot03420 Nucleotide excision repair 2
sot03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 3
osa03020 RNA polymerase 2
osa03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 4
tae03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 12
tae03008 Ribosome biogenesis in eukaryotes 5
tae04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00190 Oxidative phosphorylation 3
sbi00350 Tyrosine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03030 DNA replication 7
cre03420 Nucleotide excision repair 4
cre03430 Mismatch repair 4
cre03410 Base excision repair 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100780528 25497860 7458146 820432 103859450 107934367 121222574 106353094 106399439 101265438 102583513 107822712 107810098 4327215 100280623 123048877 123067312 123175958 123449710 8084318 8084993 100838674 5715339
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