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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100780968   uncharacterized LOC100780968 
 gma-r.7   100780968   uncharacterized LOC100780968 
 mtr-u.5   11436384   uncharacterized LOC11436384 
 ppo-u.5   7460491   uncharacterized LOC7460491 
 ath-u.5   AT4G01860   Transducin family protein / WD-40 repeat family protein 
 vvi-u.5   100257191   uncharacterized LOC100257191 
 sly-u.5   101246276   uncharacterized LOC101246276 
 osa-u.5   4331367   uncharacterized LOC4331367 
 zma-u.5   103639610   WD repeat-containing protein 6 
 zma-u.5   103628657   uncharacterized LOC103628657 

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Top 50 coexpressed genes to 100780968 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100780968 (gma-u.5 coexpression data)

CoexMap"100780968"


gmaLOC100780968 | Entrez gene ID : 100780968      
Species gma mtr ppo ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 2 1 1 1 1 1 1 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0030488 [list] [network] tRNA methylation  (45 genes)  IEA  
GO CC
GO:0005737 [list] [network] cytoplasm  (9233 genes)  IEA  
GO MF
GO:0005515 [list] [network] protein binding  (7243 genes)  IEA  
Protein XP_006604757.1 [sequence] [blastp]
XP_040868638.1 [sequence] [blastp]
Subcellular
localization
wolf
plas 9  (predict for XP_006604757.1)
plas 5,  nucl 3,  cyto 1,  cysk_nucl 1  (predict for XP_040868638.1)
Subcellular
localization
TargetP
other 9  (predict for XP_006604757.1)
mito 7  (predict for XP_040868638.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100780968

.
gma-r.7
for
100780968

.
mtr-u.5
for
11436384

.
ppo-u.5
for
7460491

.
ath-u.5
for
AT4G01860

.
vvi-u.5
for
100257191

.
sly-u.5
for
101246276

.
osa-u.5
for
4331367

.
zma-u.5
for
103639610

.
zma-u.5
for
103628657

.


Ortholog ID: 10872
Species ath gma sly osa zma zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol AT4G01860 LOC100780968 LOC101246276 LOC4331367 LOC103639610 LOC103628657 LOC103836797 LOC100257191 LOC7460491 LOC11436384 LOC123106102 LOC123099250 LOC123450032 LOC107922723 LOC107911143 LOC106426669 LOC106430109 CHLRE_04g217991v5 LOC8078011 LOC102588580 LOC102622435 LOC100829848 LOC107796276 LOC107812959
Function* Transducin family protein / WD-40 repeat family protein uncharacterized LOC100780968 uncharacterized LOC101246276 uncharacterized LOC4331367 WD repeat-containing protein 6 uncharacterized LOC103628657 uncharacterized LOC103836797 uncharacterized LOC100257191 uncharacterized LOC7460491 uncharacterized LOC11436384 uncharacterized LOC123106102 WD repeat-containing protein 6 WD repeat-containing protein 6 uncharacterized WD repeat-containing protein C1306.02 uncharacterized LOC107911143 uncharacterized LOC106426669 WD repeat-containing protein 6 uncharacterized protein WD repeat-containing protein 6 uncharacterized LOC102588580 uncharacterized LOC102622435 uncharacterized LOC100829848 uncharacterized LOC107796276 uncharacterized LOC107812959
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 5
ath04120 Ubiquitin mediated proteolysis 2
ath03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 4
sly03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03018 RNA degradation 3
osa03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03018 RNA degradation 2
ppo04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 4
mtr03020 RNA polymerase 3
mtr03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 5
tae03020 RNA polymerase 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 3
tae03040 Spliceosome 3
tae03020 RNA polymerase 3
tae00790 Folate biosynthesis 2
tae01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 3
hvu03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00970 Aminoacyl-tRNA biosynthesis 2
sbi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03013 Nucleocytoplasmic transport 6
sot03008 Ribosome biogenesis in eukaryotes 3
sot03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 5
bdi03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04146 Peroxisome 2
nta00970 Aminoacyl-tRNA biosynthesis 2
nta03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 4
nta03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 827918 100780968 101246276 4331367 103639610 103628657 103836797 100257191 7460491 11436384 123106102 123099250 123450032 107922723 107911143 106426669 106430109 5724262 8078011 102588580 102622435 100829848 107796276 107812959
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