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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100781960   pentatricopeptide repeat-containing protein At3g29290 
 gma-r.7   100781960   pentatricopeptide repeat-containing protein At3g29290 
 gma-u.5   100779515   pentatricopeptide repeat-containing protein At3g29290 
 mtr-u.5   11434812   pentatricopeptide repeat-containing protein At3g29290 
 ppo-u.5   7467875   pentatricopeptide repeat-containing protein At3g29290 
 ath-u.5   emb2076   Pentatricopeptide repeat (PPR) superfamily protein 
 vvi-u.5   100266202   pentatricopeptide repeat-containing protein At3g29290 
 sly-u.5   101265496   pentatricopeptide repeat-containing protein At3g29290 
 zma-u.5   100382024   Pentatricopeptide repeat-containing protein 
 zma-u.5   103642304   pentatricopeptide repeat-containing protein At3g29290 

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Top 50 coexpressed genes to 100781960 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100781960 (gma-u.5 coexpression data)

CoexMap"100781960"


gmaLOC100781960 | Entrez gene ID : 100781960    
Species gma mtr ppo ath vvi sly zma sot hvu tae cit sbi ghi cre bna nta bdi bra osa
Paralog 3 1 1 1 1 1 2 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (7243 genes)  IEA  
Protein XP_040874372.1 [sequence] [blastp]
XP_040874373.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  mito 3,  nucl 1,  pero 1  (predict for XP_040874372.1)
chlo 5,  mito 4,  nucl 1,  pero 1  (predict for XP_040874373.1)
Subcellular
localization
TargetP
mito 6  (predict for XP_040874372.1)
mito 6  (predict for XP_040874373.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100781960

.
gma-r.7
for
100781960

.
gma-u.5
for
100779515

.
mtr-u.5
for
11434812

.
ppo-u.5
for
7467875

.
ath-u.5
for
emb2076

.
vvi-u.5
for
100266202

.
sly-u.5
for
101265496

.
zma-u.5
for
100382024

.
zma-u.5
for
103642304

.


Ortholog ID: 9519
Species ath gma gma sly zma zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol emb2076 LOC100781960 LOC100779515 LOC101265496 LOC100382024 LOC103642304 LOC103875086 LOC100266202 LOC7467875 LOC11434812 LOC123093009 LOC123098289 LOC123449344 LOC107888556 LOC121221094 LOC106349122 LOC106410954 CHLRE_08g358250v5 LOC8054211 LOC102592612 LOC102618823 LOC100839338 LOC107777868 LOC107817066
Function* Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At3g29290 pentatricopeptide repeat-containing protein At3g29290 pentatricopeptide repeat-containing protein At3g29290 Pentatricopeptide repeat-containing protein pentatricopeptide repeat-containing protein At3g29290 pentatricopeptide repeat-containing protein At3g29290 pentatricopeptide repeat-containing protein At3g29290 pentatricopeptide repeat-containing protein At3g29290 pentatricopeptide repeat-containing protein At3g29290 pentatricopeptide repeat-containing protein At3g29290 pentatricopeptide repeat-containing protein At3g29290 pentatricopeptide repeat-containing protein At3g29290 pentatricopeptide repeat-containing protein At3g29290 pentatricopeptide repeat-containing protein At3g29290 pentatricopeptide repeat-containing protein At3g29290 pentatricopeptide repeat-containing protein At3g29290 uncharacterized protein pentatricopeptide repeat-containing protein At3g29290 pentatricopeptide repeat-containing protein At3g29290 pentatricopeptide repeat-containing protein At3g29290 pentatricopeptide repeat-containing protein At3g29290 pentatricopeptide repeat-containing protein At3g29290-like pentatricopeptide repeat-containing protein At3g29290
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00730 Thiamine metabolism 3
tae03060 Protein export 3
tae04141 Protein processing in endoplasmic reticulum 3
tae04145 Phagosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00730 Thiamine metabolism 3
tae03060 Protein export 2
tae04141 Protein processing in endoplasmic reticulum 2
tae04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00240 Pyrimidine metabolism 2
nta01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00240 Pyrimidine metabolism 2
nta01232 Nucleotide metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 822586 100781960 100779515 101265496 100382024 103642304 103875086 100266202 7467875 11434812 123093009 123098289 123449344 107888556 121221094 106349122 106410954 5727782 8054211 102592612 102618823 100839338 107777868 107817066
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