ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
gma-u.5	100782498	GBF-interacting protein 1
gma-r.7	100782498	GBF-interacting protein 1
gma-m.5	100782498	GBF-interacting protein 1
gma-u.5	100803908	uncharacterized LOC100803908
gma-u.5	100783978	putative uncharacterized protein DDB_G0288537
gma-u.5	100776017	uncharacterized LOC100776017
mtr-u.5	11422612	uncharacterized LOC11422612
ppo-u.5	18095289	uncharacterized LOC18095289
ppo-u.5	7483591	uncharacterized LOC7483591
ath-u.5	AT1G29350	RNA polymerase II degradation factor-like protein (DUF1296)
ath-u.5	AT1G29370	RNA polymerase II degradation factor-like protein (DUF1296)
bra-r.6	103828968	uncharacterized LOC103828968
bra-r.6	103835277	RNA polymerase II degradation factor 1
bra-r.6	103865321	RNA polymerase II degradation factor 1
vvi-u.5	100245196	uncharacterized LOC100245196
ghi-r.1	107951003	uncharacterized LOC107951003
ghi-r.1	107935907	GBF-interacting protein 1-like
ghi-r.1	107913143	uncharacterized LOC107913143
bna-r.1	111212305	uncharacterized LOC111212305
bna-r.1	111213931	RNA polymerase II degradation factor 1
bna-r.1	106437817	uncharacterized LOC106437817
cit-r.1	102630898	uncharacterized LOC102630898
sly-u.5	101252351	cell wall protein AWA1
sly-u.5	101266097	flocculation protein FLO11-like
sot-r.1	102591371	uncharacterized LOC102591371
sot-r.1	102592710	uncharacterized LOC102592710
nta-r.1	107773927	uncharacterized LOC107773927
nta-r.1	107829141	uncharacterized LOC107829141
osa-u.5	4327865	GBF-interacting protein 1-like
osa-u.5	4339638	uncharacterized LOC4339638
zma-u.5	103628766	uncharacterized LOC103628766
zma-u.5	103636139	uncharacterized LOC103636139
zma-u.5	103630744	cell wall protein AWA1-like
tae-r.2	123078734	uncharacterized LOC123078734
tae-r.2	123146468	uncharacterized LOC123146468
tae-r.2	123068679	uncharacterized LOC123068679
hvu-r.1	123444030	uncharacterized LOC123444030
hvu-r.1	123450718	uncharacterized LOC123450718
sbi-r.1	8063611	uncharacterized LOC8063611
sbi-r.1	110434200	uncharacterized LOC110434200
bdi-r.1	100840916	uncharacterized LOC100840916
bdi-r.1	100846506	uncharacterized LOC100846506

Top 50 coexpressed genes to 100782498 (gma-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 100782498 (gma-u.5 coexpression data)

CoexMap"100782498"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

GO:0005515 [list] [network] protein binding

(7243 genes)

IEA

Protein

XP_014623476.1 [sequence] [blastp]
XP_014623477.1 [sequence] [blastp]
XP_040865934.1 [sequence] [blastp]
XP_040865935.1 [sequence] [blastp]
XP_040865936.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 9	(predict for XP_014623476.1)
nucl 9	(predict for XP_014623477.1)
nucl 9	(predict for XP_040865934.1)
nucl 9	(predict for XP_040865935.1)
nucl 9	(predict for XP_040865936.1)

Subcellular
localization
TargetP

other 4, chlo 3	(predict for XP_014623476.1)
other 4, chlo 3	(predict for XP_014623477.1)
other 4, chlo 3	(predict for XP_040865934.1)
other 4, chlo 3	(predict for XP_040865935.1)
other 4, chlo 3	(predict for XP_040865936.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	gma-u.5 for 100782498	gma-r.7 for 100782498	gma-m.5 for 100782498	gma-u.5 for 100803908	gma-u.5 for 100783978	gma-u.5 for 100776017	mtr-u.5 for 11422612	ppo-u.5 for 18095289	ppo-u.5 for 7483591	ath-u.5 for AT1G29350	ath-u.5 for AT1G29370	bra-r.6 for 103828968	bra-r.6 for 103835277	bra-r.6 for 103865321	vvi-u.5 for 100245196	ghi-r.1 for 107951003	ghi-r.1 for 107935907	ghi-r.1 for 107913143	bna-r.1 for 111212305	bna-r.1 for 111213931	bna-r.1 for 106437817	cit-r.1 for 102630898	sly-u.5 for 101252351	sly-u.5 for 101266097	sot-r.1 for 102591371	sot-r.1 for 102592710	nta-r.1 for 107773927	nta-r.1 for 107829141	osa-u.5 for 4327865	osa-u.5 for 4339638	zma-u.5 for 103628766	zma-u.5 for 103636139	zma-u.5 for 103630744	tae-r.2 for 123078734	tae-r.2 for 123146468	tae-r.2 for 123068679	hvu-r.1 for 123444030	hvu-r.1 for 123450718	sbi-r.1 for 8063611	sbi-r.1 for 110434200	bdi-r.1 for 100840916	bdi-r.1 for 100846506

Ortholog

Ortholog ID: 2682

Species

gma

mtr

ppo

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

uncharacterized LOC100803908

putative uncharacterized protein DDB_G0288537

uncharacterized LOC100776017

uncharacterized LOC11422612

uncharacterized LOC18095289

uncharacterized LOC7483591

RNA polymerase II degradation factor-like protein (DUF1296)

uncharacterized LOC103828968

RNA polymerase II degradation factor 1

uncharacterized LOC103857526

uncharacterized LOC100245196

uncharacterized LOC107951003

GBF-interacting protein 1-like

uncharacterized LOC107905861

uncharacterized LOC111212305

RNA polymerase II degradation factor 1-like

RNA polymerase II degradation factor 1

uncharacterized LOC102630898

cell wall protein AWA1

flocculation protein FLO11-like

uncharacterized LOC102591371

uncharacterized LOC102592710

uncharacterized LOC107773927

uncharacterized LOC107829141

GBF-interacting protein 1-like

uncharacterized LOC4339638

uncharacterized LOC103636139

cell wall protein AWA1-like

GBF-interacting protein 1

uncharacterized LOC123068679

uncharacterized LOC123183163

uncharacterized LOC123070284

uncharacterized LOC123444030

uncharacterized LOC123450718

uncharacterized LOC8063611

uncharacterized LOC110434200

uncharacterized LOC100840916

uncharacterized LOC100846506

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03018	RNA degradation	3
mtr03040	Spliceosome	2
mtr04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03010	Ribosome	9
ppo04141	Protein processing in endoplasmic reticulum	3
ppo04626	Plant-pathogen interaction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03040	Spliceosome	2
ath03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03008	Ribosome biogenesis in eukaryotes	3
bra03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03008	Ribosome biogenesis in eukaryotes	2
bra03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03013	Nucleocytoplasmic transport	2
bna03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04142	Lysosome	3
sly04144	Endocytosis	3
sly05100	Bacterial invasion of epithelial cells	3
sly04120	Ubiquitin mediated proteolysis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03040	Spliceosome	3
sly04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03040	Spliceosome	3
sot03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03040	Spliceosome	6
nta04141	Protein processing in endoplasmic reticulum	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03040	Spliceosome	6
nta04141	Protein processing in endoplasmic reticulum	2
nta03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03013	Nucleocytoplasmic transport	3
osa03040	Spliceosome	3
osa04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03050	Proteasome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03050	Proteasome	2
zma03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03050	Proteasome	3
hvu03060	Protein export	2
hvu04141	Protein processing in endoplasmic reticulum	2
hvu03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00562	Inositol phosphate metabolism	2
sbi00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03050	Proteasome	2
bdi03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04141	Protein processing in endoplasmic reticulum	2

Expression

Expression pattern

Entrez Gene ID^*

100803908

100783978

100776017

11422612

18095289

7483591

839809

839812

103828968

103835277

103857526

100245196

107951003

107935907

107905861

111212305

106361652

106432791

102630898

101252351

101266097

102591371

102592710

107773927

107829141

4327865

4339638

103636139

103630744

101027201

123068679

123183163

123070284

123444030

123450718

8063611

110434200

100840916

100846506

The preparation time of this page was 0.3 [sec].


Species	gma	mtr	ppo	ath	bra	vvi	ghi	bna	cit	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	6	1	2	2	3	1	3	3	1	2	2	2	2	3	3	2	2	2	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100782498 (gma-u.5 coexpression data)

Top 50 enrichment test to 100782498 (gma-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**