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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100782798   rRNA-processing protein FCF1 homolog 
 gma-r.7   100782798   rRNA-processing protein FCF1 homolog 
 gma-m.5   100782798   rRNA-processing protein FCF1 homolog 
 gma-u.5   100813838   rRNA-processing protein FCF1 homolog 
 mtr-u.5   11432192   rRNA-processing protein FCF1 homolog 
 mtr-u.5   11431764   rRNA-processing protein FCF1 homolog 
 ppo-u.5   7492746   uncharacterized LOC7492746 
 ppo-u.5   7457372   uncharacterized LOC7457372 
 ath-u.5   AT2G46230   PIN domain-like family protein 
 bra-r.6   103866274   rRNA-processing protein FCF1 homolog 
 bra-r.6   103866489   rRNA-processing protein FCF1 homolog 
 vvi-u.5   109124100   uncharacterized LOC109124100 
 vvi-u.5   100249458   uncharacterized LOC100249458 
 ghi-r.1   107922808   rRNA-processing protein FCF1 homolog 
 ghi-r.1   107909765   rRNA-processing protein FCF1 homolog 
 bna-r.1   106394547   rRNA-processing protein FCF1 homolog 
 bna-r.1   106380198   rRNA-processing protein FCF1 homolog 
 bna-r.1   106450710   rRNA-processing protein FCF1 homolog 
 cit-r.1   102629063   uncharacterized LOC102629063 
 cit-r.1   127901126   uncharacterized LOC127901126 
 sly-u.5   101252860   uncharacterized LOC101252860 
 sot-r.1   102602793   rRNA-processing protein FCF1 homolog 
 nta-r.1   107762120   uncharacterized LOC107762120 
 nta-r.1   107829506   uncharacterized LOC107829506 
 osa-u.5   4340192   uncharacterized LOC4340192 
 zma-u.5   118473283   rRNA-processing protein FCF1 homolog 
 zma-u.5   100272977   uncharacterized LOC100272977 
 tae-r.2   123149124   rRNA-processing protein FCF1 homolog 
 tae-r.2   123157359   rRNA-processing protein FCF1 homolog 
 tae-r.2   123165068   rRNA-processing protein FCF1 homolog 
 hvu-r.1   123409981   rRNA-processing protein FCF1 homolog 
 sbi-r.1   8069177   rRNA-processing protein FCF1 homolog 
 bdi-r.1   100828871   rRNA-processing protein FCF1 homolog 
 cre-r.1   CHLRE_16g679450v5   uncharacterized protein 

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Top 50 coexpressed genes to 100782798 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100782798 (gma-u.5 coexpression data)

CoexMap"100782798"


gmaLOC100782798 | Entrez gene ID : 100782798      
Species gma mtr ppo ath bra vvi ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 2 2 1 2 2 2 3 2 1 1 2 1 2 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG gmx03008 [list] [network] Ribosome biogenesis in eukaryotes (605 genes)
GO BP
GO CC
GO:0032040 [list] [network] small-subunit processome  (81 genes)  IEA  
GO:0005730 [list] [network] nucleolus  (353 genes)  IEA  
GO MF
Protein XP_003540279.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 7,  nucl 1,  cysk_nucl 1,  extr 1,  golg 1  (predict for XP_003540279.1)
Subcellular
localization
TargetP
other 5  (predict for XP_003540279.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100782798
gma-r.7
for
100782798
gma-m.5
for
100782798
gma-u.5
for
100813838
mtr-u.5
for
11432192
mtr-u.5
for
11431764
ppo-u.5
for
7492746
ppo-u.5
for
7457372
ath-u.5
for
AT2G46230
bra-r.6
for
103866274
bra-r.6
for
103866489
vvi-u.5
for
109124100
vvi-u.5
for
100249458
ghi-r.1
for
107922808
ghi-r.1
for
107909765
bna-r.1
for
106394547
bna-r.1
for
106380198
bna-r.1
for
106450710
cit-r.1
for
102629063
cit-r.1
for
127901126
sly-u.5
for
101252860
sot-r.1
for
102602793
nta-r.1
for
107762120
nta-r.1
for
107829506
osa-u.5
for
4340192
zma-u.5
for
118473283
zma-u.5
for
100272977
tae-r.2
for
123149124
tae-r.2
for
123157359
tae-r.2
for
123165068
hvu-r.1
for
123409981
sbi-r.1
for
8069177
bdi-r.1
for
100828871
cre-r.1
for
CHLRE_16g679450v5


Ortholog ID: 4891
Species gma gma mtr mtr ppo ppo ath bra bra vvi vvi ghi ghi bna bna bna cit cit sly sot nta nta osa zma zma tae tae tae hvu sbi bdi cre
Symbol LOC100782798 LOC100813838 LOC11432192 LOC11431764 LOC7492746 LOC7457372 AT2G46230 LOC103866274 LOC103866489 LOC109124100 LOC100249458 LOC107922808 LOC107909765 LOC106380198 LOC106450710 LOC106396585 LOC102629063 LOC127901126 LOC101252860 LOC102602793 LOC107762120 LOC107829506 LOC4340192 LOC103638052 LOC118473282 LOC123149124 LOC123157359 LOC123165068 LOC123409981 LOC8069177 LOC100828871 CHLRE_16g679450v5
Function* rRNA-processing protein FCF1 homolog rRNA-processing protein FCF1 homolog rRNA-processing protein FCF1 homolog rRNA-processing protein FCF1 homolog uncharacterized LOC7492746 uncharacterized LOC7457372 PIN domain-like family protein rRNA-processing protein FCF1 homolog rRNA-processing protein FCF1 homolog uncharacterized LOC109124100 uncharacterized LOC100249458 rRNA-processing protein FCF1 homolog rRNA-processing protein FCF1 homolog rRNA-processing protein FCF1 homolog rRNA-processing protein FCF1 homolog rRNA-processing protein FCF1 homolog uncharacterized LOC102629063 uncharacterized LOC127901126 uncharacterized LOC101252860 rRNA-processing protein FCF1 homolog uncharacterized LOC107762120 uncharacterized LOC107829506 uncharacterized LOC4340192 rRNA-processing protein FCF1 homolog rRNA-processing protein FCF1 homolog rRNA-processing protein FCF1 homolog rRNA-processing protein FCF1 homolog rRNA-processing protein FCF1 homolog rRNA-processing protein FCF1 homolog rRNA-processing protein FCF1 homolog rRNA-processing protein FCF1 homolog uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 3
gma03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 2
gma03022 Basal transcription factors 2
gma03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 3
mtr04120 Ubiquitin mediated proteolysis 2
mtr04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 14
ppo03008 Ribosome biogenesis in eukaryotes 4
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 4
ppo03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 3
ath03008 Ribosome biogenesis in eukaryotes 3
ath03040 Spliceosome 2
ath03018 RNA degradation 2
ath03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 7
bra03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 2
vvi00510 N-Glycan biosynthesis 2
vvi00513 Various types of N-glycan biosynthesis 2
vvi04141 Protein processing in endoplasmic reticulum 2
vvi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 4
vvi03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 3
ghi00261 Monobactam biosynthesis 2
ghi00300 Lysine biosynthesis 2
ghi01230 Biosynthesis of amino acids 2
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 3
ghi03010 Ribosome 3
ghi00261 Monobactam biosynthesis 2
ghi00300 Lysine biosynthesis 2
ghi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 4
bna03020 RNA polymerase 2
bna03013 Nucleocytoplasmic transport 2
bna03015 mRNA surveillance pathway 2
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 4
bna03020 RNA polymerase 2
bna03013 Nucleocytoplasmic transport 2
bna03015 mRNA surveillance pathway 2
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 3
cit00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 3
cit03010 Ribosome 2
cit00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 5
sot03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 4
nta03022 Basal transcription factors 2
nta04141 Protein processing in endoplasmic reticulum 2
nta04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 2
nta03022 Basal transcription factors 2
nta04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 3
osa03020 RNA polymerase 2
osa03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 4
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 4
tae03020 RNA polymerase 2
tae03018 RNA degradation 2
tae03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 6
tae03018 RNA degradation 2
tae03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 13
hvu03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 4
bdi03008 Ribosome biogenesis in eukaryotes 4
bdi00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03008 Ribosome biogenesis in eukaryotes 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100782798 100813838 11432192 11431764 7492746 7457372 819231 103866274 103866489 109124100 100249458 107922808 107909765 106380198 106450710 106396585 102629063 127901126 101252860 102602793 107762120 107829506 4340192 103638052 118473282 123149124 123157359 123165068 123409981 8069177 100828871 5721537
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