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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100782862   ribosomal L1 domain-containing protein 1 
 gma-r.7   100782862   ribosomal L1 domain-containing protein 1 
 gma-u.5   100815650   ribosomal L1 domain-containing protein 1 
 mtr-u.5   11418643   ribosomal L1 domain-containing protein 1 
 ppo-u.5   7474067   uncharacterized LOC7474067 
 ppo-u.5   7484918   uncharacterized LOC7484918 
 ath-u.5   AT2G42650   Ribosomal protein L1p/L10e family 
 ath-u.5   AT3G58660   Ribosomal protein L1p/L10e family 
 ath-u.5   AT1G06380   Ribosomal protein L1p/L10e family 
 vvi-u.5   100264299   uncharacterized LOC100264299 
 sly-u.5   101263646   uncharacterized LOC101263646 
 sly-u.5   101253372   uncharacterized LOC101253372 
 osa-u.5   4339582   uncharacterized LOC4339582 
 zma-u.5   100279960   uncharacterized LOC100279960 
 zma-u.5   100191559   uncharacterized LOC100191559 

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Top 50 coexpressed genes to 100782862 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100782862 (gma-u.5 coexpression data)

CoexMap"100782862"


gmaLOC100782862 | Entrez gene ID : 100782862      
Species gma mtr ppo ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 3 1 2 3 1 2 1 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0000470 [list] [network] maturation of LSU-rRNA  (75 genes)  IEA  
GO CC
GO:0030686 [list] [network] 90S preribosome  (71 genes)  IEA  
GO:0022625 [list] [network] cytosolic large ribosomal subunit  (230 genes)  IEA  
GO MF
GO:0003723 [list] [network] RNA binding  (2019 genes)  IEA  
Protein XP_003545905.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 5,  chlo 2,  cyto 2  (predict for XP_003545905.1)
Subcellular
localization
TargetP
other 7  (predict for XP_003545905.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100782862

.
gma-r.7
for
100782862

.
gma-u.5
for
100815650

.
mtr-u.5
for
11418643

.
ppo-u.5
for
7474067

.
ppo-u.5
for
7484918

.
ath-u.5
for
AT2G42650

.
ath-u.5
for
AT3G58660

.
ath-u.5
for
AT1G06380

.
vvi-u.5
for
100264299

.
sly-u.5
for
101263646

.
sly-u.5
for
101253372

.
osa-u.5
for
4339582

.
zma-u.5
for
100279960

.
zma-u.5
for
100191559

.


Ortholog ID: 4058
Species ath ath gma gma sly sly osa zma zma bra bra vvi ppo ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot sot cit bdi nta nta
Symbol AT1G06380 AT2G42650 LOC100782862 LOC100815650 LOC101263646 LOC101253372 LOC4339582 LOC100191559 LOC100279960 LOC103830178 LOC103862969 LOC100264299 LOC7474067 LOC7484918 LOC11418643 LOC123067680 LOC123145300 LOC123449905 LOC107888490 LOC107931348 LOC106353178 LOC106368287 CHLRE_07g314100v5 LOC110430218 LOC107063314 LOC102595050 LOC102624801 LOC100828988 LOC107774981 LOC107765074
Function* Ribosomal protein L1p/L10e family Ribosomal protein L1p/L10e family ribosomal L1 domain-containing protein 1 ribosomal L1 domain-containing protein 1 uncharacterized LOC101263646 uncharacterized LOC101253372 uncharacterized LOC4339582 uncharacterized LOC100191559 uncharacterized LOC100279960 putative ribosome biogenesis protein C8F11.04 ribosomal L1 domain-containing protein 1 uncharacterized LOC100264299 uncharacterized LOC7474067 uncharacterized LOC7484918 ribosomal L1 domain-containing protein 1 ribosomal L1 domain-containing protein 1 ribosomal L1 domain-containing protein 1 ribosomal L1 domain-containing protein 1-like ribosomal L1 domain-containing protein 1 ribosomal L1 domain-containing protein 1 putative ribosome biogenesis protein C8F11.04 ribosomal L1 domain-containing protein 1 uncharacterized protein ribosomal L1 domain-containing protein 1-like ribosomal L1 domain-containing protein 1-like ribosomal L1 domain-containing protein 1 uncharacterized LOC102624801 ribosomal L1 domain-containing protein 1 uncharacterized LOC107774981 uncharacterized LOC107765074
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03020 RNA polymerase 2
ath03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 5
gma00230 Purine metabolism 2
gma01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 3
sly03010 Ribosome 3
sly03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 3
osa03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 6
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 3
nta00230 Purine metabolism 2
nta01232 Nucleotide metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 837149 818865 100782862 100815650 101263646 101253372 4339582 100191559 100279960 103830178 103862969 100264299 7474067 7484918 11418643 123067680 123145300 123449905 107888490 107931348 106353178 106368287 5726518 110430218 107063314 102595050 102624801 100828988 107774981 107765074
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