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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100784509   sorting nexin 2B 
 gma-r.7   100784509   sorting nexin 2B 
 gma-u.5   100803157   sorting nexin 2B 
 gma-u.5   100792216   sorting nexin 2B 
 gma-u.5   100805370   sorting nexin 2B 
 mtr-u.5   11410086   sorting nexin 2B 
 mtr-u.5   11434073   sorting nexin 2B 
 ppo-u.5   7498144   sorting nexin 2B 
 ath-u.5   SNX2b   sorting nexin 2B 
 ath-u.5   SNX2a   sorting nexin 2A 
 bra-r.6   103855715   sorting nexin 2B 
 bra-r.6   103847085   sorting nexin 2B 
 bra-r.6   103845270   sorting nexin 2A 
 vvi-u.5   100265711   sorting nexin 2A 
 vvi-u.5   100251814   sorting nexin 2A 
 ghi-r.1   121215584   sorting nexin 2A 
 ghi-r.1   107927085   sorting nexin 2A 
 bna-r.1   106446094   sorting nexin 2B 
 bna-r.1   106426305   sorting nexin 2B-like 
 bna-r.1   106376286   sorting nexin 2A 
 cit-r.1   102617618   sorting nexin 2B-like 
 sly-u.5   101262726   sorting nexin 2A 
 sly-u.5   101265271   sorting nexin 2B 
 sot-r.1   102581838   sorting nexin 2B 
 sot-r.1   102579002   sorting nexin 2A-like 
 nta-r.1   107798446   sorting nexin 2B 
 nta-r.1   107792285   sorting nexin 2B 
 nta-r.1   107786570   sorting nexin 2B 
 osa-u.5   4338483   sorting nexin 2A 
 osa-u.5   4339089   sorting nexin 2A 
 zma-u.5   100279925   Sorting nexin 2B 
 zma-u.5   100277081   uncharacterized LOC100277081 
 zma-u.5   103630267   sorting nexin 2B 
 tae-r.2   123186284   sorting nexin 2A 
 tae-r.2   123181706   sorting nexin 2B 
 tae-r.2   123136834   sorting nexin 2B 
 hvu-r.1   123444997   sorting nexin 2A-like 
 hvu-r.1   123444836   sorting nexin 2A-like 
 hvu-r.1   123441268   sorting nexin 2B-like 
 sbi-r.1   8066781   sorting nexin 2B 
 bdi-r.1   106866224   sorting nexin 2A-like 
 bdi-r.1   100846795   sorting nexin 2B 
 bdi-r.1   100846202   sorting nexin 2B 
 cre-r.1   CHLRE_10g462300v5   uncharacterized protein 

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Top 50 coexpressed genes to 100784509 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100784509 (gma-u.5 coexpression data)

CoexMap"100784509"


gmaLOC100784509 | Entrez gene ID : 100784509      
Species gma mtr ppo ath bra vvi ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre
Paralog 5 2 1 2 3 2 2 3 1 2 2 3 2 3 3 3 1 3 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0035091 [list] [network] phosphatidylinositol binding  (139 genes)  IEA  
Protein XP_003518421.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  nucl 2,  mito 1,  plas 1,  golg 1,  golg_plas 1,  mito_plas 1  (predict for XP_003518421.1)
Subcellular
localization
TargetP
other 8  (predict for XP_003518421.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100784509
gma-r.7
for
100784509
gma-u.5
for
100803157
gma-u.5
for
100792216
gma-u.5
for
100805370
mtr-u.5
for
11410086
mtr-u.5
for
11434073
ppo-u.5
for
7498144
ath-u.5
for
SNX2b
ath-u.5
for
SNX2a
bra-r.6
for
103855715
bra-r.6
for
103847085
bra-r.6
for
103845270
vvi-u.5
for
100265711
vvi-u.5
for
100251814
ghi-r.1
for
121215584
ghi-r.1
for
107927085
bna-r.1
for
106446094
bna-r.1
for
106426305
bna-r.1
for
106376286
cit-r.1
for
102617618
sly-u.5
for
101262726
sly-u.5
for
101265271
sot-r.1
for
102581838
sot-r.1
for
102579002
nta-r.1
for
107798446
nta-r.1
for
107792285
nta-r.1
for
107786570
osa-u.5
for
4338483
osa-u.5
for
4339089
zma-u.5
for
100279925
zma-u.5
for
100277081
zma-u.5
for
103630267
tae-r.2
for
123186284
tae-r.2
for
123181706
tae-r.2
for
123136834
hvu-r.1
for
123444997
hvu-r.1
for
123444836
hvu-r.1
for
123441268
sbi-r.1
for
8066781
bdi-r.1
for
106866224
bdi-r.1
for
100846795
bdi-r.1
for
100846202
cre-r.1
for
CHLRE_10g462300v5


Ortholog ID: 3037
Species gma gma gma mtr mtr ppo ath ath bra bra bra vvi vvi ghi ghi bna bna bna cit sly sly sot sot nta nta nta osa osa zma zma zma tae tae tae hvu hvu hvu sbi bdi bdi bdi cre
Symbol LOC100784509 LOC100803157 LOC100792216 LOC11410086 LOC11434073 LOC7498144 SNX2b SNX2a LOC103855715 LOC103847085 LOC103845270 LOC100265711 LOC100251814 LOC121215584 LOC107927085 LOC106446094 LOC106376286 LOC106420516 LOC102617618 LOC101262726 LOC101265271 LOC102581838 LOC102579002 LOC107792285 LOC107786570 LOC107779398 LOC4338483 LOC4339089 LOC100279925 LOC100277081 LOC100191880 LOC123136834 LOC123128862 LOC123071257 LOC123444997 LOC123444836 LOC123441268 LOC8066781 LOC106866224 LOC100846795 LOC100846202 CHLRE_10g462300v5
Function* sorting nexin 2B sorting nexin 2B sorting nexin 2B sorting nexin 2B sorting nexin 2B sorting nexin 2B sorting nexin 2B sorting nexin 2A sorting nexin 2B sorting nexin 2B sorting nexin 2A sorting nexin 2A sorting nexin 2A sorting nexin 2A sorting nexin 2A sorting nexin 2B sorting nexin 2A sorting nexin 2A sorting nexin 2B-like sorting nexin 2A sorting nexin 2B sorting nexin 2B sorting nexin 2A-like sorting nexin 2B sorting nexin 2B sorting nexin 2B sorting nexin 2A sorting nexin 2A Sorting nexin 2B uncharacterized LOC100277081 PX domain containing protein sorting nexin 2B sorting nexin 2B sorting nexin 2A sorting nexin 2A-like sorting nexin 2A-like sorting nexin 2B-like sorting nexin 2B sorting nexin 2A-like sorting nexin 2B sorting nexin 2B uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00190 Oxidative phosphorylation 2
gma03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 2
gma03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01200 Carbon metabolism 3
gma00920 Sulfur metabolism 3
gma00020 Citrate cycle (TCA cycle) 2
gma00500 Starch and sucrose metabolism 2
gma00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04141 Protein processing in endoplasmic reticulum 13
mtr04145 Phagosome 5
mtr03060 Protein export 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04141 Protein processing in endoplasmic reticulum 10
mtr04145 Phagosome 5
mtr03060 Protein export 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04141 Protein processing in endoplasmic reticulum 15
ppo04145 Phagosome 4
ppo00510 N-Glycan biosynthesis 2
ppo03060 Protein export 2
ppo04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 3
ath03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03250 Viral life cycle - HIV-1 3
bra03272 Virion - Hepatitis viruses 3
bra04144 Endocytosis 3
bra04141 Protein processing in endoplasmic reticulum 3
bra03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04141 Protein processing in endoplasmic reticulum 3
bra04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 2
sly04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 2
sot04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 7
nta00510 N-Glycan biosynthesis 5
nta00513 Various types of N-glycan biosynthesis 5
nta00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03015 mRNA surveillance pathway 5
nta03013 Nucleocytoplasmic transport 4
nta04142 Lysosome 4
nta04141 Protein processing in endoplasmic reticulum 4
nta00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00230 Purine metabolism 2
nta00240 Pyrimidine metabolism 2
nta01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03060 Protein export 2
zma04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03250 Viral life cycle - HIV-1 4
tae03272 Virion - Hepatitis viruses 4
tae04144 Endocytosis 4
tae04136 Autophagy - other 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04141 Protein processing in endoplasmic reticulum 5
bdi00520 Amino sugar and nucleotide sugar metabolism 3
bdi01250 Biosynthesis of nucleotide sugars 3
bdi04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03015 mRNA surveillance pathway 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100784509 100803157 100792216 11410086 11434073 7498144 830603 835957 103855715 103847085 103845270 100265711 100251814 121215584 107927085 106446094 106376286 106420516 102617618 101262726 101265271 102581838 102579002 107792285 107786570 107779398 4338483 4339089 100279925 100277081 100191880 123136834 123128862 123071257 123444997 123444836 123441268 8066781 106866224 100846795 100846202 5724161
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