ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
gma-u.5	100784770	profilin
gma-r.7	100784770	profilin
gma-u.5	100499717	uncharacterized LOC100499717
gma-u.5	100799819	profilin
mtr-u.5	112417225	profilin-2
mtr-u.5	11412193	profilin-1
ppo-u.5	7476637	profilin-6
ppo-u.5	7483551	profilin-4
ppo-u.5	7462285	profilin
ath-u.5	PRF4	profilin 4
ath-u.5	PFN2	profilin 2
bra-r.6	103837977	profilin-1
bra-r.6	103845093	profilin-5
vvi-u.5	100262863	profilin-1
vvi-u.5	100268013	profilin-2
vvi-u.5	100254869	profilin-1
ghi-r.1	107901159	profilin-2
ghi-r.1	107907176	profilin-2
bna-r.1	106436072	profilin-1-like
bna-r.1	106432834	profilin
bna-r.1	106429259	profilin-4
cit-r.1	102614190	profilin-3
cit-r.1	102628423	profilin-4
cit-r.1	102628130	profilin
sly-u.5	profilin	profilin protein
sly-u.5	PRO1	profilin
sot-r.1	102582238	profilin
sot-r.1	102579230	profilin-1-like
nta-r.1	107829930	profilin-2
nta-r.1	107776462	profilin-1-like
osa-u.5	4348316	profilin-A-like
osa-u.5	4348317	profilin-A-like
osa-u.5	4340155	profilin LP04-like
zma-u.5	103636667	profilin-7
zma-u.5	100283110	profilin A
zma-u.5	541662	profilin
tae-r.2	123058522	profilin-2
tae-r.2	123060379	profilin
tae-r.2	123065618	profilin-2
hvu-r.1	123442907	profilin
hvu-r.1	123440235	profilin-2-like
hvu-r.1	123426682	profilin-1-like
sbi-r.1	8071328	profilin-4
sbi-r.1	8062164	profilin-A
bdi-r.1	100822745	profilin-2
bdi-r.1	100839680	profilin-1
bdi-r.1	100846284	profilin-2
cre-r.1	CHLRE_10g427250v5	uncharacterized protein

Top 50 coexpressed genes to 100784770 (gma-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 100784770 (gma-u.5 coexpression data)

CoexMap"100784770"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO:0005938 [list] [network] cell cortex

(129 genes)

IEA

GO MF

GO:0003785 [list] [network] actin monomer binding

(8 genes)

IEA

Protein

XP_003525290.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto 6, cysk 1, cysk_plas 1, nucl 1, extr 1

(predict for XP_003525290.1)

Subcellular
localization
TargetP

other 8

(predict for XP_003525290.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	gma-u.5 for 100784770	gma-r.7 for 100784770	gma-u.5 for 100499717	gma-u.5 for 100799819	mtr-u.5 for 112417225	mtr-u.5 for 11412193	ppo-u.5 for 7476637	ppo-u.5 for 7483551	ppo-u.5 for 7462285	ath-u.5 for PRF4	ath-u.5 for PFN2	bra-r.6 for 103837977	bra-r.6 for 103845093	vvi-u.5 for 100262863	vvi-u.5 for 100268013	vvi-u.5 for 100254869	ghi-r.1 for 107901159	ghi-r.1 for 107907176	bna-r.1 for 106436072	bna-r.1 for 106432834	bna-r.1 for 106429259	cit-r.1 for 102614190	cit-r.1 for 102628423	cit-r.1 for 102628130	sly-u.5 for profilin	sly-u.5 for PRO1	sot-r.1 for 102582238	sot-r.1 for 102579230	nta-r.1 for 107829930	nta-r.1 for 107776462	osa-u.5 for 4348316	osa-u.5 for 4348317	osa-u.5 for 4340155	zma-u.5 for 103636667	zma-u.5 for 100283110	zma-u.5 for 541662	tae-r.2 for 123058522	tae-r.2 for 123060379	tae-r.2 for 123065618	hvu-r.1 for 123442907	hvu-r.1 for 123440235	hvu-r.1 for 123426682	sbi-r.1 for 8071328	sbi-r.1 for 8062164	bdi-r.1 for 100822745	bdi-r.1 for 100839680	bdi-r.1 for 100846284	cre-r.1 for CHLRE_10g427250v5

Ortholog

Ortholog ID: 484

Species

gma

mtr

ppo

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

PRF4

PRF1

PRO1

Function^*

uncharacterized LOC100499717

profilin-4

profilin-2

profilin-1

profilin-6

profilin-4

profilin

profilin 4

profilin 1

profilin-1

profilin

profilin-2

profilin-1

profilin-1-like

profilin-4

profilin-3

profilin-4

profilin

profilin protein

profilin

profilin-1-like

profilin-3

profilin

profilin-A-like

profilin LP04-like

profilin-7

profilin homolog 1

Profilin homolog 5

profilin-2

profilin

profilin-1-like

profilin-2-like

profilin-1-like

profilin-4

profilin-1

profilin-2

uncharacterized protein

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00480	Glutathione metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00040	Pentose and glucuronate interconversions	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03040	Spliceosome	2
mtr00190	Oxidative phosphorylation	2
mtr04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03008	Ribosome biogenesis in eukaryotes	3
ppo03013	Nucleocytoplasmic transport	3
ppo03250	Viral life cycle - HIV-1	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00541	Biosynthesis of various nucleotide sugars	4
ppo01250	Biosynthesis of nucleotide sugars	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04145	Phagosome	8
ppo00190	Oxidative phosphorylation	6
ppo04142	Lysosome	4
ppo04517	IgSF CAM signaling	2
ppo04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04016	MAPK signaling pathway - plant	4
ath04070	Phosphatidylinositol signaling system	4
ath04075	Plant hormone signal transduction	4
ath04626	Plant-pathogen interaction	4
ath00190	Oxidative phosphorylation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04016	MAPK signaling pathway - plant	3
bra04070	Phosphatidylinositol signaling system	3
bra04075	Plant hormone signal transduction	3
bra04626	Plant-pathogen interaction	3
bra00020	Citrate cycle (TCA cycle)	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04145	Phagosome	6
vvi00190	Oxidative phosphorylation	5
vvi04517	IgSF CAM signaling	5
vvi04814	Motor proteins	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04130	SNARE interactions in vesicular transport	2
vvi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04144	Endocytosis	5
ghi04145	Phagosome	4
ghi04517	IgSF CAM signaling	4
ghi04814	Motor proteins	4
ghi04130	SNARE interactions in vesicular transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03410	Base excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00053	Ascorbate and aldarate metabolism	2
bna00480	Glutathione metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00330	Arginine and proline metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04145	Phagosome	3
cit00190	Oxidative phosphorylation	3
cit04144	Endocytosis	3
cit04130	SNARE interactions in vesicular transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04814	Motor proteins	8
cit04145	Phagosome	6
cit04517	IgSF CAM signaling	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00190	Oxidative phosphorylation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04120	Ubiquitin mediated proteolysis	3
sly00710	Carbon fixation by Calvin cycle	2
sly01200	Carbon metabolism	2
sly04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04144	Endocytosis	3
sly04814	Motor proteins	3
sly04145	Phagosome	2
sly00750	Vitamin B6 metabolism	2
sly01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00190	Oxidative phosphorylation	8
sot04145	Phagosome	7
sot04142	Lysosome	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00040	Pentose and glucuronate interconversions	8
nta03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03013	Nucleocytoplasmic transport	2
nta04120	Ubiquitin mediated proteolysis	2
nta00040	Pentose and glucuronate interconversions	2
nta00052	Galactose metabolism	2
nta00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00190	Oxidative phosphorylation	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00053	Ascorbate and aldarate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04075	Plant hormone signal transduction	3
zma00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03083	Polycomb repressive complex	2
zma04120	Ubiquitin mediated proteolysis	2
zma04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04626	Plant-pathogen interaction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00270	Cysteine and methionine metabolism	2
tae00999	Biosynthesis of various plant secondary metabolites	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04141	Protein processing in endoplasmic reticulum	2
sbi00480	Glutathione metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00190	Oxidative phosphorylation	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre03420	Nucleotide excision repair	4
cre04120	Ubiquitin mediated proteolysis	4
cre04141	Protein processing in endoplasmic reticulum	4
cre03050	Proteasome	3
cre03020	RNA polymerase	2

Expression

Expression pattern

Entrez Gene ID^*

100499717

100789770

112417225

11412193

7476637

7483551

7462285

829055

816495

103837977

100262863

100254869

100261121

107962708

107893315

107907174

106376194

106447116

111200007

102614190

102628423

102628130

543782

544018

543830

102579230

107777553

107821114

4348316

4348317

4340155

103636667

542409

542625

123065618

123077435

543315

123440235

123426682

8071328

100839680

100846284

100822123

5728166

The preparation time of this page was 0.2 [sec].


Species	gma	mtr	ppo	ath	bra	vvi	ghi	bna	cit	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	4	2	3	2	2	3	2	3	3	2	2	2	3	3	3	3	2	3	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100784770 (gma-u.5 coexpression data)

Top 50 enrichment test to 100784770 (gma-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**