ATTED-II : GeneCoexpression result

Species	Gene	Description
gma-u.5	100788168	protein RADIALIS-like 3
mtr-u.5	11408177	protein RADIALIS-like 1
mtr-u.5	11409706	protein RADIALIS-like 1
ppo-u.5	7464026	protein RADIALIS-like 4
ath-u.5	RL4	RAD-like 4
sly-u.5	101247471	protein RADIALIS-like 4
sly-u.5	fsm1	SANT/MYB domain protein
osa-u.5	9269452	protein RADIALIS-like 1
osa-u.5	4339715	protein RADIALIS-like 3
osa-u.5	4326605	protein RADIALIS-like 2
zma-u.5	100284746	uncharacterized LOC100284746
zma-u.5	100284980	uncharacterized LOC100284980
zma-u.5	100281018	uncharacterized LOC100281018

functional annotation

KEGG

GO BP

GO CC

GO MF

GO:0003700 [list] [network] DNA-binding transcription factor activity

(2313 genes)

IEA

Protein

XP_003540679.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 6, nucl_plas 4, cyto 2, chlo 1, plas 1, extr 1

(predict for XP_003540679.1)

Subcellular
localization
TargetP

other 6, chlo 3

(predict for XP_003540679.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	gma-u.5 for 100788168	mtr-u.5 for 11408177	mtr-u.5 for 11409706	ppo-u.5 for 7464026	ath-u.5 for RL4	sly-u.5 for 101247471	sly-u.5 for fsm1	osa-u.5 for 9269452	osa-u.5 for 4339715	osa-u.5 for 4326605	zma-u.5 for 100284746	zma-u.5 for 100284980	zma-u.5 for 100281018

Ortholog ID: 327

Species

gma

mtr

ppo

ath

bra

ghi

cit

sly

sot

osa

zma

tae

hvu

sbi

bdi

Symbol

LOC100804396

LOC11413763

LOC7480132

RL4

MEE3

fsm1

Function^*

protein RADIALIS-like 1

protein RADIALIS-like 3

RAD-like 4

Homeodomain-like superfamily protein

protein RADIALIS-like 4

protein RADIALIS-like 3

protein RADIALIS-like 2

protein RADIALIS-like 3

protein RADIALIS-like 6

protein RADIALIS-like 4

SANT/MYB domain protein

protein RADIALIS-like 5

protein RADIALIS-like 1

protein RADIALIS-like 3

protein RADIALIS-like 1

uncharacterized LOC100284980

uncharacterized LOC100284746

protein RADIALIS-like 3

protein RADIALIS-like 4

protein RADIALIS-like 3

protein RADIALIS-like 4

protein RADIALIS-like 3

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00280	Valine, leucine and isoleucine degradation	2
mtr01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04075	Plant hormone signal transduction	3
bra04070	Phosphatidylinositol signaling system	2
bra00220	Arginine biosynthesis	2
bra00250	Alanine, aspartate and glutamate metabolism	2
bra00630	Glyoxylate and dicarboxylate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00040	Pentose and glucuronate interconversions	9
ghi04075	Plant hormone signal transduction	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00906	Carotenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00910	Nitrogen metabolism	3
sbi01310	Nitrogen cycle	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04626	Plant-pathogen interaction	2

Expression

Expression pattern

Entrez Gene ID^*

100804396

11413763

7480132

5007884

816703

103874077

103834985

107928859

107897630

102613839

102630994

543759

101261869

107061001

4339715

9269452

100284980

100284746

123182340

123145223

123409188

123451766

8058207

8073158

100846607

100828980

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 100788168 (gma-u.5 coexpression data)

Top 50 enrichment test to 100788168 (gma-u.5 coexpression data)


Species	gma	mtr	ppo	ath	sly	osa	zma	hvu	vvi	bna	cit	bra	ghi	sbi	bdi	nta	tae	cre	sot
Paralog	1	2	1	1	2	3	3	0	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100788168 (gma-u.5 coexpression data)

Top 50 enrichment test to 100788168 (gma-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**