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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107908177   protein RADIALIS-like 2 
 ghi-r.1   107905436   protein RADIALIS-like 6 
 ghi-r.1   107903124   protein RADIALIS-like 3 
 ath-u.5   RL4   RAD-like 4 
 bra-r.6   103874077   protein RADIALIS-like 4 
 bra-r.6   103834985   protein RADIALIS-like 3 
 bra-r.6   103872755   protein RADIALIS-like 5 
 bna-r.1   125589866   protein RADIALIS-like 5 
 bna-r.1   106432744   protein RADIALIS-like 4 
 cit-r.1   102625117   protein RADIALIS-like 3 
 cit-r.1   102613839   protein RADIALIS-like 6 
 cit-r.1   102627803   protein RADIALIS-like 2 
 ppo-u.5   7480132   protein RADIALIS-like 3 
 mtr-u.5   11408177   protein RADIALIS-like 1 
 mtr-u.5   11409706   protein RADIALIS-like 1 
 sly-u.5   101246530   protein RADIALIS-like 3 
 sly-u.5   101261869   protein RADIALIS-like 5 
 sly-u.5   fsm1   SANT/MYB domain protein 
 sot-r.1   107061001   protein RADIALIS-like 1 
 nta-r.1   107772557   protein RADIALIS-like 1 
 osa-u.5   9269452   protein RADIALIS-like 1 
 osa-u.5   4339715   protein RADIALIS-like 3 
 zma-u.5   100284746   uncharacterized LOC100284746 
 zma-u.5   100281018   uncharacterized LOC100281018 
 zma-u.5   100284980   uncharacterized LOC100284980 
 tae-r.2   123128132   protein RADIALIS-like 4 
 tae-r.2   123182340   protein RADIALIS-like 3 
 hvu-r.1   123409188   protein RADIALIS-like 4 
 hvu-r.1   123403907   protein RADIALIS-like 3 
 sbi-r.1   8064723   protein RADIALIS-like 3 
 sbi-r.1   8058207   protein RADIALIS-like 3 
 sbi-r.1   8073158   protein RADIALIS-like 3 
 bdi-r.1   100823169   protein RADIALIS-like 4 
 bdi-r.1   100827355   protein RADIALIS-like 4 
 bdi-r.1   100828980   protein RADIALIS-like 3 

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Top 50 coexpressed genes to 107908177 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107908177 (ghi-r.1 coexpression data)

CoexMap"107908177"


ghiLOC107908177 | Entrez gene ID : 107908177    
Species ghi ath bra bna cit ppo mtr sly sot nta osa zma tae hvu sbi bdi gma cre vvi
Paralog 3 1 3 2 3 1 2 3 1 1 2 3 2 2 3 3 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0003700 [list] [network] DNA-binding transcription factor activity  (3140 genes)  IEA  
Protein XP_016690914.1 [sequence] [blastp]
XP_016690915.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  nucl 1,  chlo 1,  plas 1,  extr 1,  cysk_nucl 1  (predict for XP_016690914.1)
cyto 8,  chlo 1,  nucl 1,  extr 1  (predict for XP_016690915.1)
Subcellular
localization
TargetP
other 7,  chlo 3  (predict for XP_016690914.1)
other 7,  chlo 3  (predict for XP_016690915.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107908177
ghi-r.1
for
107905436
ghi-r.1
for
107903124
ath-u.5
for
RL4
bra-r.6
for
103874077
bra-r.6
for
103834985
bra-r.6
for
103872755
bna-r.1
for
125589866
bna-r.1
for
106432744
cit-r.1
for
102625117
cit-r.1
for
102613839
cit-r.1
for
102627803
ppo-u.5
for
7480132
mtr-u.5
for
11408177
mtr-u.5
for
11409706
sly-u.5
for
101246530
sly-u.5
for
101261869
sly-u.5
for
fsm1
sot-r.1
for
107061001
nta-r.1
for
107772557
osa-u.5
for
9269452
osa-u.5
for
4339715
zma-u.5
for
100284746
zma-u.5
for
100281018
zma-u.5
for
100284980
tae-r.2
for
123128132
tae-r.2
for
123182340
hvu-r.1
for
123409188
hvu-r.1
for
123403907
sbi-r.1
for
8064723
sbi-r.1
for
8058207
sbi-r.1
for
8073158
bdi-r.1
for
100823169
bdi-r.1
for
100827355
bdi-r.1
for
100828980


Ortholog ID: 327
Species ghi ghi ghi ath ath bra bra bra bna cit cit cit gma ppo ppo mtr sly sly sly sot nta osa osa osa zma zma zma tae tae tae hvu hvu hvu sbi sbi sbi bdi bdi bdi
Symbol LOC107928859 LOC121212191 LOC107897630 RL4 MEE3 LOC103874077 LOC103834985 LOC103852941 LOC106370064 LOC102625117 LOC102613839 LOC102630994 LOC100804396 LOC7480132 LOC7471949 LOC11413763 LOC101246530 LOC101261869 fsm1 LOC107061001 LOC107792932 LOC9269452 LOC4339715 LOC4326605 LOC100284746 LOC100281018 LOC100284980 LOC123182340 LOC123145223 LOC123182346 LOC123409188 LOC123451766 LOC123451776 LOC8064723 LOC8058207 LOC8073158 LOC100823169 LOC100828980 LOC100846607
Function* protein RADIALIS-like 2 protein RADIALIS-like 1 protein RADIALIS-like 3 RAD-like 4 Homeodomain-like superfamily protein protein RADIALIS-like 4 protein RADIALIS-like 3 protein RADIALIS-like 6 protein RADIALIS-like 3 protein RADIALIS-like 3 protein RADIALIS-like 6 protein RADIALIS-like 4 protein RADIALIS-like 1 protein RADIALIS-like 3 transcription factor RADIALIS protein RADIALIS-like 1 protein RADIALIS-like 3 protein RADIALIS-like 5 SANT/MYB domain protein protein RADIALIS-like 1 protein RADIALIS-like 4 protein RADIALIS-like 1 protein RADIALIS-like 3 protein RADIALIS-like 2 uncharacterized LOC100284746 uncharacterized LOC100281018 uncharacterized LOC100284980 protein RADIALIS-like 3 protein RADIALIS-like 4 protein RADIALIS-like 3 protein RADIALIS-like 4 protein RADIALIS-like 3 protein RADIALIS-like 3 protein RADIALIS-like 3 protein RADIALIS-like 3 protein RADIALIS-like 3 protein RADIALIS-like 4 protein RADIALIS-like 3 protein RADIALIS-like 4
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00040 Pentose and glucuronate interconversions 9
ghi04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 3
bra04070 Phosphatidylinositol signaling system 2
bra00220 Arginine biosynthesis 2
bra00250 Alanine, aspartate and glutamate metabolism 2
bra00630 Glyoxylate and dicarboxylate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00740 Riboflavin metabolism 2
cit04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00280 Valine, leucine and isoleucine degradation 2
mtr01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00040 Pentose and glucuronate interconversions 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00910 Nitrogen metabolism 3
sbi01310 Nitrogen cycle 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04626 Plant-pathogen interaction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107928859 121212191 107897630 5007884 816703 103874077 103834985 103852941 106370064 102625117 102613839 102630994 100804396 7480132 7471949 11413763 101246530 101261869 543759 107061001 107792932 9269452 4339715 4326605 100284746 100281018 100284980 123182340 123145223 123182346 123409188 123451766 123451776 8064723 8058207 8073158 100823169 100828980 100846607
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