ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
gma-u.5	100785578	protein ESKIMO 1
gma-r.7	100785578	protein ESKIMO 1
gma-u.5	100785597	protein ESKIMO 1
gma-u.5	100789919	protein ESKIMO 1-like
mtr-u.5	11419038	protein ESKIMO 1
mtr-u.5	11419934	protein ESKIMO 1
ppo-u.5	7474427	xylan O-acetyltransferase 1
ppo-u.5	7494503	xylan O-acetyltransferase 1
ppo-u.5	7474426	xylan O-acetyltransferase 1
ath-u.5	TBL28	TRICHOME BIREFRINGENCE-LIKE 28
ath-u.5	ESK1	trichome birefringence-like protein (DUF828)
bra-r.6	103830030	protein ESKIMO 1
bra-r.6	103857911	protein trichome birefringence-like 28
vvi-u.5	100243314	xylan O-acetyltransferase 1
ghi-r.1	107899555	protein ESKIMO 1
ghi-r.1	107918894	protein ESKIMO 1
ghi-r.1	107931256	protein ESKIMO 1
bna-r.1	106420567	protein trichome birefringence-like 28
bna-r.1	106352903	xylan O-acetyltransferase 1
bna-r.1	106360812	xylan O-acetyltransferase 1
cit-r.1	102626227	xylan O-acetyltransferase 1-like
sly-u.5	101250702	xylan O-acetyltransferase 1-like
sly-u.5	101260212	xylan O-acetyltransferase 1
sot-r.1	102604440	protein ESKIMO 1
sot-r.1	102595587	protein ESKIMO 1-like
nta-r.1	107762195	xylan O-acetyltransferase 1-like
nta-r.1	107793795	xylan O-acetyltransferase 1-like
nta-r.1	107776375	xylan O-acetyltransferase 1
osa-u.5	4339070	protein trichome birefringence-like 28
osa-u.5	4344387	protein trichome birefringence-like 28
osa-u.5	4349545	protein trichome birefringence-like 28
zma-u.5	100501717	Putative DUF231 domain containing family protein
zma-u.5	100382326	putative DUF231 domain containing family protein
tae-r.2	123051394	protein trichome birefringence-like 28
tae-r.2	123111415	protein trichome birefringence-like 28
tae-r.2	123097777	protein trichome birefringence-like 28
hvu-r.1	123440990	protein trichome birefringence-like 28
hvu-r.1	123424601	protein trichome birefringence-like 28
hvu-r.1	123395529	protein trichome birefringence-like 28
sbi-r.1	8061888	protein trichome birefringence-like 28
sbi-r.1	8084991	protein trichome birefringence-like 28
sbi-r.1	8064763	protein trichome birefringence-like 28
bdi-r.1	100837935	protein trichome birefringence-like 28
bdi-r.1	100830147	protein trichome birefringence-like 28
bdi-r.1	100838848	protein trichome birefringence-like 28

Top 50 coexpressed genes to 100785578 (gma-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 100785578 (gma-u.5 coexpression data)

CoexMap"100785578"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO:0005794 [list] [network] Golgi apparatus

(934 genes)

IEA

GO MF

GO:0016413 [list] [network] O-acetyltransferase activity

(126 genes)

IEA

Protein

XP_014625412.1 [sequence] [blastp]
XP_014625414.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 4, cyto 3, chlo 2, cysk_nucl 2, nucl_plas 2	(predict for XP_014625412.1)
vacu 3, extr 2, E.R._vacu 2, chlo 1, E.R. 1	(predict for XP_014625414.1)

Subcellular
localization
TargetP

mito 7, other 5	(predict for XP_014625412.1)
scret 9	(predict for XP_014625414.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	gma-u.5 for 100785578	gma-r.7 for 100785578	gma-u.5 for 100785597	gma-u.5 for 100789919	mtr-u.5 for 11419038	mtr-u.5 for 11419934	ppo-u.5 for 7474427	ppo-u.5 for 7494503	ppo-u.5 for 7474426	ath-u.5 for TBL28	ath-u.5 for ESK1	bra-r.6 for 103830030	bra-r.6 for 103857911	vvi-u.5 for 100243314	ghi-r.1 for 107899555	ghi-r.1 for 107918894	ghi-r.1 for 107931256	bna-r.1 for 106420567	bna-r.1 for 106352903	bna-r.1 for 106360812	cit-r.1 for 102626227	sly-u.5 for 101250702	sly-u.5 for 101260212	sot-r.1 for 102604440	sot-r.1 for 102595587	nta-r.1 for 107762195	nta-r.1 for 107793795	nta-r.1 for 107776375	osa-u.5 for 4339070	osa-u.5 for 4344387	osa-u.5 for 4349545	zma-u.5 for 100501717	zma-u.5 for 100382326	tae-r.2 for 123051394	tae-r.2 for 123111415	tae-r.2 for 123097777	hvu-r.1 for 123440990	hvu-r.1 for 123424601	hvu-r.1 for 123395529	sbi-r.1 for 8061888	sbi-r.1 for 8084991	sbi-r.1 for 8064763	bdi-r.1 for 100837935	bdi-r.1 for 100830147	bdi-r.1 for 100838848

Ortholog

Ortholog ID: 1169

Species

gma

mtr

ppo

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

TBL28

ESK1

Function^*

protein ESKIMO 1

protein ESKIMO 1-like

protein ESKIMO 1

xylan O-acetyltransferase 1

TRICHOME BIREFRINGENCE-LIKE 28

trichome birefringence-like protein (DUF828)

protein ESKIMO 1

protein trichome birefringence-like 28

xylan O-acetyltransferase 1

protein ESKIMO 1

protein trichome birefringence-like 28

xylan O-acetyltransferase 1

xylan O-acetyltransferase 1-like

xylan O-acetyltransferase 1

protein ESKIMO 1

protein ESKIMO 1-like

xylan O-acetyltransferase 1-like

xylan O-acetyltransferase 1

xylan O-acetyltransferase 1-like

protein trichome birefringence-like 28

xylan O-acetyltransferase 3-like

protein trichome birefringence-like 28

protein trichome birefringence-like 33

putative DUF231 domain containing family protein

protein trichome birefringence-like 28

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04145	Phagosome	2
gma04148	Efferocytosis	2
gma04517	IgSF CAM signaling	2
gma04518	Integrin signaling	2
gma04620	Toll-like receptor signaling pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00520	Amino sugar and nucleotide sugar metabolism	2
ppo01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00040	Pentose and glucuronate interconversions	2
ath00053	Ascorbate and aldarate metabolism	2
ath01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00500	Starch and sucrose metabolism	5
ghi00051	Fructose and mannose metabolism	2
ghi00941	Flavonoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00670	One carbon pool by folate	4
sot01200	Carbon metabolism	3
sot00260	Glycine, serine and threonine metabolism	2
sot00460	Cyanoamino acid metabolism	2
sot00630	Glyoxylate and dicarboxylate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00564	Glycerophospholipid metabolism	2
nta00565	Ether lipid metabolism	2
nta04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00940	Phenylpropanoid biosynthesis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00520	Amino sugar and nucleotide sugar metabolism	2
osa01250	Biosynthesis of nucleotide sugars	2
osa04144	Endocytosis	2
osa00280	Valine, leucine and isoleucine degradation	2
osa00650	Butanoate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00500	Starch and sucrose metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00600	Sphingolipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04626	Plant-pathogen interaction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00561	Glycerolipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00940	Phenylpropanoid biosynthesis	4
sbi00941	Flavonoid biosynthesis	2
sbi00945	Stilbenoid, diarylheptanoid and gingerol biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04145	Phagosome	6
bdi04517	IgSF CAM signaling	6
bdi04814	Motor proteins	6
bdi00520	Amino sugar and nucleotide sugar metabolism	5
bdi01250	Biosynthesis of nucleotide sugars	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04075	Plant hormone signal transduction	2

Expression

Expression pattern

Entrez Gene ID^*

100785578

100785597

100789919

11419038

11419934

7494503

7494505

818606

824765

103830030

103857911

100243314

107918894

107957303

107957307

106420567

106352903

106368120

102626227

101250702

101260212

102604440

102595587

107762195

107801889

107807771

4344387

4351254

4338512

103634496

103653698

100191843

123085577

123120508

123129145

123440990

123424601

123448910

8061888

8076627

8084032

100837935

100838848

100840217

The preparation time of this page was 0.2 [sec].


Species	gma	mtr	ppo	ath	bra	vvi	ghi	bna	cit	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	4	2	3	2	2	1	3	3	1	2	2	3	3	2	3	3	3	3	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100785578 (gma-u.5 coexpression data)

Top 50 enrichment test to 100785578 (gma-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**