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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5  PHR4  MYB-CC domain-containing transcription factor PHR4 
 gma-r.7  PHR4  MYB-CC domain-containing transcription factor PHR4 
 gma-u.5  PHR34  MYB-CC domain-containing transcription factor PHR34 
 gma-u.5  PHR2  MYB-CC domain-containing transcription factor PHR2 
 gma-u.5  PHR11  MYB-CC domain-containing transcription factor PHR11 
 mtr-u.5  11418060  myb family transcription factor PHL8 
 mtr-u.5  11446293  myb family transcription factor PHL8 
 ppo-u.5  7498175  myb family transcription factor PHL8 
 ath-u.5  AT1G69580  Homeodomain-like superfamily protein 
 vvi-u.5  100255052  myb family transcription factor PHL8 
 sly-u.5  101248294  myb family transcription factor PHL8 

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Top 50 coexpressed genes to PHR4 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to PHR4 (gma-u.5 coexpression data)

CoexMap"100787178"


gmaPHR4 | Entrez gene ID : 100787178
Species gma mtr ppo ath vvi sly sbi nta bra osa cre cit hvu bdi sot zma tae bna ghi
Paralog 5 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0003700 [list] [network] DNA-binding transcription factor activity  (2313 genes)  IEA  
GO:0003677 [list] [network] DNA binding  (3517 genes)  IEA  
Protein XP_003520080.1 [sequence] [blastp]
XP_014621920.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  cyto 2,  chlo 1  (predict for XP_003520080.1)
nucl 6,  cyto 2,  chlo 1  (predict for XP_014621920.1)
Subcellular
localization
TargetP
other 7,  chlo 3  (predict for XP_003520080.1)
other 7  (predict for XP_014621920.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

gma-u.5
for
PHR4

.

gma-r.7
for
PHR4

.

gma-u.5
for
PHR34

.

gma-u.5
for
PHR2

.

gma-u.5
for
PHR11

.

mtr-u.5
for
11418060

.

mtr-u.5
for
11446293

.

ppo-u.5
for
7498175

.

ath-u.5
for
AT1G69580

.

vvi-u.5
for
100255052

.

sly-u.5
for
101248294

.


Ortholog ID: 7089
Species ath gma gma sly bra vvi ppo mtr mtr ghi ghi bna sot cit nta
Symbol AT1G69580 PHR2 PHR34 LOC101248294 LOC103831359 LOC100255052 LOC7498175 LOC11446293 LOC11418060 LOC107910148 LOC107918599 LOC106420744 LOC102602966 LOC102612487 LOC107812672
Function* Homeodomain-like superfamily protein MYB-CC domain-containing transcription factor PHR2 MYB-CC domain-containing transcription factor PHR34 myb family transcription factor PHL8 myb family transcription factor PHL8 myb family transcription factor PHL8 myb family transcription factor PHL8 myb family transcription factor PHL8 myb family transcription factor PHL8 myb family transcription factor PHL8 myb family transcription factor PHL8 myb family transcription factor PHL8-like uncharacterized LOC102602966 myb family transcription factor PHL8-like myb family transcription factor PHL8
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 3
gma00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04016 MAPK signaling pathway - plant 2
ghi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04016 MAPK signaling pathway - plant 2
ghi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04141 Protein processing in endoplasmic reticulum 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 843294 100784670 100805252 101248294 103831359 100255052 7498175 11446293 11418060 107910148 107918599 106420744 102602966 102612487 107812672
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