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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100788114   uncharacterized LOC100788114 
 gma-r.7   100788114   uncharacterized LOC100788114 
 gma-m.5   100788114   uncharacterized LOC100788114 
 gma-u.5   100795370   uncharacterized LOC100795370 
 mtr-u.5   25487444   uncharacterized LOC25487444 
 ppo-u.5   7491173   uncharacterized LOC7491173 
 vvi-u.5   100267175   uncharacterized LOC100267175 
 ghi-r.1   121212671   uncharacterized LOC121212671 
 cit-r.1   102626935   uncharacterized LOC102626935 
 sly-u.5   101268477   uncharacterized LOC101268477 
 sot-r.1   102592220   uncharacterized LOC102592220 
 nta-r.1   107775706   uncharacterized LOC107775706 
 nta-r.1   107815081   uncharacterized LOC107815081 
 osa-u.5   4331200   uncharacterized LOC4331200 
 zma-u.5   103654098   DUF2146 family protein 
 tae-r.2   123139977   uncharacterized LOC123139977 
 tae-r.2   123129082   uncharacterized LOC123129082 
 tae-r.2   123146250   uncharacterized LOC123146250 
 hvu-r.1   123405901   uncharacterized LOC123405901 
 sbi-r.1   8055335   uncharacterized LOC8055335 
 bdi-r.1   100827084   uncharacterized LOC100827084 
 cre-r.1   CHLRE_07g347700v5   uncharacterized protein 

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Top 50 coexpressed genes to 100788114 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100788114 (gma-u.5 coexpression data)

CoexMap"100788114"


gmaLOC100788114 | Entrez gene ID : 100788114      
Species gma mtr ppo vvi ghi cit sly sot nta osa zma tae hvu sbi bdi cre bna bra ath
Paralog 4 1 1 1 1 1 1 1 2 1 1 3 1 1 1 1 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0000184 [list] [network] nuclear-transcribed mRNA catabolic process, nonsense-mediated decay  (26 genes)  IEA  
GO CC
GO MF
Protein XP_003540204.2 [sequence] [blastp]
XP_006592715.1 [sequence] [blastp]
XP_006592716.1 [sequence] [blastp]
XP_006592717.1 [sequence] [blastp]
XP_014620477.1 [sequence] [blastp]
XP_040863494.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  nucl 1,  plas 1,  nucl_plas 1  (predict for XP_003540204.2)
chlo 9,  nucl 1,  plas 1,  nucl_plas 1  (predict for XP_006592715.1)
chlo 9,  nucl 1,  plas 1,  nucl_plas 1  (predict for XP_006592716.1)
chlo 9,  nucl 1,  plas 1,  nucl_plas 1  (predict for XP_006592717.1)
chlo 9,  nucl 1,  plas 1,  nucl_plas 1  (predict for XP_014620477.1)
chlo 9,  nucl 1,  plas 1,  nucl_plas 1  (predict for XP_040863494.1)
Subcellular
localization
TargetP
chlo 9  (predict for XP_003540204.2)
chlo 9  (predict for XP_006592715.1)
chlo 9  (predict for XP_006592716.1)
chlo 9  (predict for XP_006592717.1)
other 3  (predict for XP_014620477.1)
chlo 9  (predict for XP_040863494.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100788114
gma-r.7
for
100788114
gma-m.5
for
100788114
gma-u.5
for
100795370
mtr-u.5
for
25487444
ppo-u.5
for
7491173
vvi-u.5
for
100267175
ghi-r.1
for
121212671
cit-r.1
for
102626935
sly-u.5
for
101268477
sot-r.1
for
102592220
nta-r.1
for
107775706
nta-r.1
for
107815081
osa-u.5
for
4331200
zma-u.5
for
103654098
tae-r.2
for
123139977
tae-r.2
for
123129082
tae-r.2
for
123146250
hvu-r.1
for
123405901
sbi-r.1
for
8055335
bdi-r.1
for
100827084
cre-r.1
for
CHLRE_07g347700v5


Ortholog ID: 12085
Species gma gma mtr ppo vvi ghi cit sly sot nta nta osa zma tae tae tae hvu sbi bdi cre
Symbol LOC100788114 LOC100795370 LOC25487444 LOC7491173 LOC100267175 LOC121212671 LOC102626935 LOC101268477 LOC102592220 LOC107775706 LOC107815081 LOC4331200 LOC103654098 LOC123139977 LOC123129082 LOC123146250 LOC123405901 LOC8055335 LOC100827084 CHLRE_07g347700v5
Function* uncharacterized LOC100788114 uncharacterized LOC100795370 uncharacterized LOC25487444 uncharacterized LOC7491173 uncharacterized LOC100267175 uncharacterized LOC121212671 uncharacterized LOC102626935 uncharacterized LOC101268477 uncharacterized LOC102592220 uncharacterized LOC107775706 uncharacterized LOC107815081 uncharacterized LOC4331200 DUF2146 family protein uncharacterized LOC123139977 uncharacterized LOC123129082 uncharacterized LOC123146250 uncharacterized LOC123405901 uncharacterized LOC8055335 uncharacterized LOC100827084 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03082 ATP-dependent chromatin remodeling 3
gma03013 Nucleocytoplasmic transport 2
gma03022 Basal transcription factors 2
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03082 ATP-dependent chromatin remodeling 2
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 2
mtr00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04142 Lysosome 3
ppo04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03083 Polycomb repressive complex 6
ghi03250 Viral life cycle - HIV-1 6
ghi03460 Fanconi anemia pathway 2
ghi04136 Autophagy - other 2
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03082 ATP-dependent chromatin remodeling 3
cit04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04120 Ubiquitin mediated proteolysis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03420 Nucleotide excision repair 2
osa04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00562 Inositol phosphate metabolism 3
tae04070 Phosphatidylinositol signaling system 3
tae04144 Endocytosis 3
tae03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03082 ATP-dependent chromatin remodeling 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100788114 100795370 25487444 7491173 100267175 121212671 102626935 101268477 102592220 107775706 107815081 4331200 103654098 123139977 123129082 123146250 123405901 8055335 100827084 5718034
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