ATTED-II : GeneCoexpression result

Species	Gene	Description
gma-u.5	100789783	F-box protein At4g22390
gma-r.7	100789783	F-box protein At4g22390
gma-u.5	102666879	F-box/kelch-repeat protein At3g06240
mtr-u.5	25502184	F-box protein CPR1
ppo-u.5	7454236	F-box/kelch-repeat protein At3g23880
ppo-u.5	112326458	F-box protein At3g07870
ath-u.5	AT3G06240	F-box family protein
ath-u.5	AT3G07870	F-box and associated interaction domains-containing protein
ath-u.5	AT3G23880	F-box and associated interaction domains-containing protein
sly-u.5	101260412	F-box/kelch-repeat protein At3g06240
sly-u.5	101260766	F-box/kelch-repeat protein At3g23880-like
sly-u.5	101261724	F-box protein CPR1

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_040873692.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 6, mito 2, plas 1, cyto_mito 1, golg_plas 1

(predict for XP_040873692.1)

Subcellular
localization
TargetP

mito 8

(predict for XP_040873692.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	gma-u.5 for 100789783	gma-r.7 for 100789783	gma-u.5 for 102666879	mtr-u.5 for 25502184	ppo-u.5 for 7454236	ppo-u.5 for 112326458	ath-u.5 for AT3G06240	ath-u.5 for AT3G07870	ath-u.5 for AT3G23880	sly-u.5 for 101260412	sly-u.5 for 101260766	sly-u.5 for 101261724

Ortholog ID: 25

Species

gma

mtr

ath

ghi

bna

sly

sot

nta

bdi

Symbol

Function^*

putative F-box protein

F-box protein CPR1

F-box/kelch-repeat protein At3g23880

F-box and associated interaction domains-containing protein

F-box family protein

F-box/kelch-repeat protein At3g06240

F-box protein At3g07870-like

F-box/kelch-repeat protein At3g23880-like

F-box/kelch-repeat protein At3g06240-like

F-box/kelch-repeat protein At3g23880

F-box/kelch-repeat protein At3g23880-like

F-box/LRR-repeat protein At2g43260

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00500	Starch and sucrose metabolism	2
gma04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04130	SNARE interactions in vesicular transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04712	Circadian rhythm - plant	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04142	Lysosome	4
bna00480	Glutathione metabolism	2
bna00600	Sphingolipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00500	Starch and sucrose metabolism	4
nta03430	Mismatch repair	2
nta04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03008	Ribosome biogenesis in eukaryotes	2

Expression

Expression pattern

Entrez Gene ID^*

100789250

100789763

25483269

819978

819798

107888906

106388992

101244418

107062273

107824897

107792385

100823474

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 100789783 (gma-u.5 coexpression data)

Top 50 enrichment test to 100789783 (gma-u.5 coexpression data)


Species	gma	mtr	ppo	ath	sly	bdi	hvu	bra	vvi	cit	bna	sbi	ghi	osa	sot	nta	cre	tae	zma
Paralog	3	1	2	3	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100789783 (gma-u.5 coexpression data)

Top 50 enrichment test to 100789783 (gma-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**