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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100790007   peptide chain release factor PrfB3, chloroplastic 
 gma-r.7   100790007   peptide chain release factor PrfB3, chloroplastic 
 gma-m.5   100790007   peptide chain release factor PrfB3, chloroplastic 
 gma-u.5   100784358   peptide chain release factor PrfB3, chloroplastic 
 mtr-u.5   11430784   peptide chain release factor PrfB3, chloroplastic 
 ppo-u.5   7496105   peptide chain release factor PrfB3, chloroplastic 
 ath-u.5   PrfB3   peptide chain release factor 
 bra-r.6   103841625   peptide chain release factor PrfB3, chloroplastic 
 vvi-u.5   100267609   peptide chain release factor PrfB3, chloroplastic 
 ghi-r.1   107933296   peptide chain release factor PrfB3, chloroplastic 
 ghi-r.1   107920123   peptide chain release factor PrfB3, chloroplastic 
 bna-r.1   106411829   peptide chain release factor PrfB3, chloroplastic 
 bna-r.1   106368016   peptide chain release factor PrfB3, chloroplastic 
 cit-r.1   102628696   peptide chain release factor PrfB3, chloroplastic 
 sly-u.5   101268238   peptide chain release factor PrfB3, chloroplastic 
 sot-r.1   102604754   peptide chain release factor PrfB3, chloroplastic 
 nta-r.1   107811230   peptide chain release factor PrfB3, chloroplastic 
 nta-r.1   107815884   peptide chain release factor PrfB3, chloroplastic 
 osa-u.5   4338612   peptide chain release factor PrfB3, chloroplastic 
 zma-u.5   100216914   peptide chain release factor 2 
 tae-r.2   123181827   peptide chain release factor PrfB3, chloroplastic 
 tae-r.2   123130380   peptide chain release factor PrfB3, chloroplastic 
 tae-r.2   123053479   peptide chain release factor PrfB3, chloroplastic 
 hvu-r.1   123440121   peptide chain release factor PrfB3, chloroplastic 
 sbi-r.1   8077931   peptide chain release factor PrfB3, chloroplastic 
 bdi-r.1   100846098   peptide chain release factor PrfB3, chloroplastic 

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Top 50 coexpressed genes to 100790007 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100790007 (gma-u.5 coexpression data)

CoexMap"100790007"


gmaLOC100790007 | Entrez gene ID : 100790007      
Species gma mtr ppo ath bra vvi ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 1 1 1 1 1 2 2 1 1 1 2 1 1 3 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006415 [list] [network] translational termination  (21 genes)  IEA  
GO CC
GO MF
GO:0003747 [list] [network] translation release factor activity  (20 genes)  IEA  
Protein XP_003535895.1 [sequence] [blastp]
XP_006588963.2 [sequence] [blastp]
XP_006588964.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  nucl 3,  chlo 2,  cyto_pero 2,  cyto_E.R. 2,  cyto_plas 2  (predict for XP_003535895.1)
chlo 6,  chlo_mito 4,  mito 2  (predict for XP_006588963.2)
chlo 3,  nucl 2,  cyto 2,  cyto_nucl 2  (predict for XP_006588964.1)
Subcellular
localization
TargetP
chlo 9  (predict for XP_003535895.1)
mito 2  (predict for XP_006588963.2)
chlo 9  (predict for XP_006588964.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100790007
gma-r.7
for
100790007
gma-m.5
for
100790007
gma-u.5
for
100784358
mtr-u.5
for
11430784
ppo-u.5
for
7496105
ath-u.5
for
PrfB3
bra-r.6
for
103841625
vvi-u.5
for
100267609
ghi-r.1
for
107933296
ghi-r.1
for
107920123
bna-r.1
for
106411829
bna-r.1
for
106368016
cit-r.1
for
102628696
sly-u.5
for
101268238
sot-r.1
for
102604754
nta-r.1
for
107811230
nta-r.1
for
107815884
osa-u.5
for
4338612
zma-u.5
for
100216914
tae-r.2
for
123181827
tae-r.2
for
123130380
tae-r.2
for
123053479
hvu-r.1
for
123440121
sbi-r.1
for
8077931
bdi-r.1
for
100846098


Ortholog ID: 10159
Species gma gma mtr ppo ath bra vvi ghi ghi bna bna cit sly sot nta nta osa zma tae tae tae hvu sbi bdi
Symbol LOC100790007 LOC100784358 LOC11430784 LOC7496105 PrfB3 LOC103841625 LOC100267609 LOC107933296 LOC107920123 LOC106411829 LOC106368016 LOC102628696 LOC101268238 LOC102604754 LOC107811230 LOC107815884 LOC4338612 LOC100216914 LOC123181827 LOC123130380 LOC123053479 LOC123440121 LOC8077931 LOC100846098
Function* peptide chain release factor PrfB3, chloroplastic peptide chain release factor PrfB3, chloroplastic peptide chain release factor PrfB3, chloroplastic peptide chain release factor PrfB3, chloroplastic peptide chain release factor peptide chain release factor PrfB3, chloroplastic peptide chain release factor PrfB3, chloroplastic peptide chain release factor PrfB3, chloroplastic peptide chain release factor PrfB3, chloroplastic peptide chain release factor PrfB3, chloroplastic peptide chain release factor PrfB3, chloroplastic peptide chain release factor PrfB3, chloroplastic peptide chain release factor PrfB3, chloroplastic peptide chain release factor PrfB3, chloroplastic peptide chain release factor PrfB3, chloroplastic peptide chain release factor PrfB3, chloroplastic peptide chain release factor PrfB3, chloroplastic peptide chain release factor 2 peptide chain release factor PrfB3, chloroplastic peptide chain release factor PrfB3, chloroplastic peptide chain release factor PrfB3, chloroplastic peptide chain release factor PrfB3, chloroplastic peptide chain release factor PrfB3, chloroplastic peptide chain release factor PrfB3, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04141 Protein processing in endoplasmic reticulum 2
bna04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 2
nta00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00710 Carbon fixation by Calvin cycle 5
tae01200 Carbon metabolism 5
tae01230 Biosynthesis of amino acids 5
tae00010 Glycolysis / Gluconeogenesis 3
tae00030 Pentose phosphate pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00710 Carbon fixation by Calvin cycle 4
tae01200 Carbon metabolism 4
tae01230 Biosynthesis of amino acids 4
tae00010 Glycolysis / Gluconeogenesis 2
tae00030 Pentose phosphate pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00710 Carbon fixation by Calvin cycle 4
tae01200 Carbon metabolism 4
tae01230 Biosynthesis of amino acids 4
tae00010 Glycolysis / Gluconeogenesis 2
tae00030 Pentose phosphate pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01200 Carbon metabolism 4
hvu00630 Glyoxylate and dicarboxylate metabolism 3
hvu00260 Glycine, serine and threonine metabolism 3
hvu00010 Glycolysis / Gluconeogenesis 2
hvu00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00630 Glyoxylate and dicarboxylate metabolism 2
bdi00860 Porphyrin metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100790007 100784358 11430784 7496105 824886 103841625 100267609 107933296 107920123 106411829 106368016 102628696 101268238 102604754 107811230 107815884 4338612 100216914 123181827 123130380 123053479 123440121 8077931 100846098
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