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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100790952   succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial 
 gma-r.7   100790952   succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial 
 gma-u.5   100527938   succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial 
 mtr-u.5   25484225   succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial 
 ppo-u.5   7474514   succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial 
 ppo-u.5   7455712   succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial 
 ath-u.5   AT2G20420   ATP citrate lyase (ACL) family protein 
 vvi-u.5   100248061   succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial 
 sly-u.5   543863   succinyl CoA ligase beta subunit 
 osa-u.5   4330016   succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial-like 
 zma-u.5   100284826   succinyl-CoA ligase beta-chain 
 zma-u.5   100284286   succinyl-CoA ligase beta-chain 

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Top 50 coexpressed genes to 100790952 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100790952 (gma-u.5 coexpression data)

CoexMap"100790952"


gmaLOC100790952 | Entrez gene ID : 100790952    
Species gma mtr ppo ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 3 1 2 1 1 1 1 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG gmx00020 [list] [network] Citrate cycle (TCA cycle) (103 genes)
gmx00640 [list] [network] Propanoate metabolism (64 genes)
gmx01200 [list] [network] Carbon metabolism (489 genes)
GO BP
GO:0006104 [list] [network] succinyl-CoA metabolic process  (2 genes)  IEA  
GO:0006099 [list] [network] tricarboxylic acid cycle  (87 genes)  IEA  
GO CC
GO:0042709 [list] [network] succinate-CoA ligase complex  (4 genes)  IEA  
GO MF
GO:0004775 [list] [network] succinate-CoA ligase (ADP-forming) activity  (4 genes)  IEA  
GO:0046872 [list] [network] metal ion binding  (3089 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (3753 genes)  IEA  
Protein XP_003542431.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 6,  chlo 2,  pero 1  (predict for XP_003542431.1)
Subcellular
localization
TargetP
mito 9  (predict for XP_003542431.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100790952

.
gma-r.7
for
100790952

.
gma-u.5
for
100527938

.
mtr-u.5
for
25484225

.
ppo-u.5
for
7474514

.
ppo-u.5
for
7455712

.
ath-u.5
for
AT2G20420

.
vvi-u.5
for
100248061

.
sly-u.5
for
543863

.
osa-u.5
for
4330016

.
zma-u.5
for
100284826

.
zma-u.5
for
100284286

.


Ortholog ID: 6495
Species ath gma gma sly osa zma zma bra vvi ppo ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol AT2G20420 LOC100527938 LOC100790952 LOC543863 LOC4330016 LOC100284286 LOC100284826 LOC103828176 LOC100248061 LOC7474514 LOC7455712 LOC25484225 LOC123144854 LOC123127746 LOC123401334 LOC107954628 LOC107954629 LOC106357563 LOC106380702 CHLRE_17g703700v5 LOC8066155 LOC102577781 LOC102626700 LOC100835038 LOC107827369 LOC107768302
Function* ATP citrate lyase (ACL) family protein succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial succinyl CoA ligase beta subunit succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial-like succinyl-CoA ligase beta-chain succinyl-CoA ligase beta-chain succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial-like succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial uncharacterized protein succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01200 Carbon metabolism 6
ath00190 Oxidative phosphorylation 6
ath00020 Citrate cycle (TCA cycle) 5
ath00640 Propanoate metabolism 3
ath00620 Pyruvate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00190 Oxidative phosphorylation 5
gma00020 Citrate cycle (TCA cycle) 4
gma00640 Propanoate metabolism 4
gma01200 Carbon metabolism 4
gma03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00190 Oxidative phosphorylation 8
gma00020 Citrate cycle (TCA cycle) 8
gma01200 Carbon metabolism 8
gma00785 Lipoic acid metabolism 5
gma01210 2-Oxocarboxylic acid metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00020 Citrate cycle (TCA cycle) 9
sly01200 Carbon metabolism 8
sly01210 2-Oxocarboxylic acid metabolism 6
sly00785 Lipoic acid metabolism 4
sly00310 Lysine degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01200 Carbon metabolism 11
osa00020 Citrate cycle (TCA cycle) 9
osa00010 Glycolysis / Gluconeogenesis 6
osa01210 2-Oxocarboxylic acid metabolism 6
osa00620 Pyruvate metabolism 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01200 Carbon metabolism 10
zma00020 Citrate cycle (TCA cycle) 9
zma01210 2-Oxocarboxylic acid metabolism 6
zma00640 Propanoate metabolism 5
zma01230 Biosynthesis of amino acids 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00020 Citrate cycle (TCA cycle) 12
zma01200 Carbon metabolism 12
zma01210 2-Oxocarboxylic acid metabolism 8
zma00640 Propanoate metabolism 6
zma00785 Lipoic acid metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03013 Nucleocytoplasmic transport 5
bra00190 Oxidative phosphorylation 2
bra03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00020 Citrate cycle (TCA cycle) 5
vvi01200 Carbon metabolism 5
vvi01210 2-Oxocarboxylic acid metabolism 4
vvi03050 Proteasome 4
vvi00010 Glycolysis / Gluconeogenesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00970 Aminoacyl-tRNA biosynthesis 6
ppo00020 Citrate cycle (TCA cycle) 3
ppo01200 Carbon metabolism 3
ppo00300 Lysine biosynthesis 2
ppo01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00510 N-Glycan biosynthesis 4
ppo00513 Various types of N-glycan biosynthesis 4
ppo04141 Protein processing in endoplasmic reticulum 4
ppo00970 Aminoacyl-tRNA biosynthesis 3
ppo00020 Citrate cycle (TCA cycle) 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00190 Oxidative phosphorylation 8
mtr00020 Citrate cycle (TCA cycle) 6
mtr01200 Carbon metabolism 6
mtr01210 2-Oxocarboxylic acid metabolism 4
mtr01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01200 Carbon metabolism 11
tae00020 Citrate cycle (TCA cycle) 6
tae00640 Propanoate metabolism 6
tae00190 Oxidative phosphorylation 5
tae01230 Biosynthesis of amino acids 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01200 Carbon metabolism 10
tae00020 Citrate cycle (TCA cycle) 6
tae00640 Propanoate metabolism 6
tae01230 Biosynthesis of amino acids 4
tae00220 Arginine biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01200 Carbon metabolism 9
hvu00020 Citrate cycle (TCA cycle) 6
hvu01210 2-Oxocarboxylic acid metabolism 5
hvu01230 Biosynthesis of amino acids 5
hvu00010 Glycolysis / Gluconeogenesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00020 Citrate cycle (TCA cycle) 4
ghi00640 Propanoate metabolism 4
ghi01200 Carbon metabolism 4
ghi00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00020 Citrate cycle (TCA cycle) 4
ghi00640 Propanoate metabolism 4
ghi01200 Carbon metabolism 4
ghi00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00020 Citrate cycle (TCA cycle) 6
bna01200 Carbon metabolism 6
bna00640 Propanoate metabolism 4
bna00010 Glycolysis / Gluconeogenesis 2
bna00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00020 Citrate cycle (TCA cycle) 6
bna01200 Carbon metabolism 6
bna00640 Propanoate metabolism 4
bna00010 Glycolysis / Gluconeogenesis 2
bna00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre01200 Carbon metabolism 9
cre00020 Citrate cycle (TCA cycle) 8
cre00190 Oxidative phosphorylation 3
cre00640 Propanoate metabolism 2
cre00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00190 Oxidative phosphorylation 10
sbi00020 Citrate cycle (TCA cycle) 6
sbi01200 Carbon metabolism 6
sbi01210 2-Oxocarboxylic acid metabolism 4
sbi00785 Lipoic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01200 Carbon metabolism 8
sot00020 Citrate cycle (TCA cycle) 7
sot00190 Oxidative phosphorylation 5
sot01210 2-Oxocarboxylic acid metabolism 4
sot00640 Propanoate metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01200 Carbon metabolism 6
cit00020 Citrate cycle (TCA cycle) 5
cit01210 2-Oxocarboxylic acid metabolism 3
cit01230 Biosynthesis of amino acids 3
cit00640 Propanoate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01200 Carbon metabolism 8
bdi00020 Citrate cycle (TCA cycle) 7
bdi00190 Oxidative phosphorylation 5
bdi00010 Glycolysis / Gluconeogenesis 5
bdi01210 2-Oxocarboxylic acid metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01240 Biosynthesis of cofactors 4
nta04141 Protein processing in endoplasmic reticulum 4
nta04144 Endocytosis 2
nta00061 Fatty acid biosynthesis 2
nta00780 Biotin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 4
nta00061 Fatty acid biosynthesis 2
nta00780 Biotin metabolism 2
nta01212 Fatty acid metabolism 2
nta01240 Biosynthesis of cofactors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 816561 100527938 100790952 543863 4330016 100284286 100284826 103828176 100248061 7474514 7455712 25484225 123144854 123127746 123401334 107954628 107954629 106357563 106380702 5717254 8066155 102577781 102626700 100835038 107827369 107768302
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