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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100791462   vacuolar protein sorting-associated protein 9A 
 gma-r.7   100791462   vacuolar protein sorting-associated protein 9A 
 gma-u.5   100810958   vacuolar protein sorting-associated protein 9A 
 gma-u.5   100792686   vacuolar protein sorting-associated protein 9A 
 mtr-u.5   11418024   vacuolar protein sorting-associated protein 9A 
 ppo-u.5   7469119   vacuolar protein sorting-associated protein 9A 
 ppo-u.5   18108389   vacuolar protein sorting-associated protein 9A 
 ath-u.5   VPS9A   Vacuolar sorting protein 9 (VPS9) domain-containing protein 
 vvi-u.5   100251775   vacuolar protein sorting-associated protein 9A 
 vvi-u.5   100252293   vacuolar protein sorting-associated protein 9A 
 sly-u.5   101253937   vacuolar protein sorting-associated protein 9A 
 osa-u.5   4332330   vacuolar protein sorting-associated protein 9A 
 osa-u.5   4334742   vacuolar protein sorting-associated protein 9A 
 zma-u.5   103640344   vacuolar protein sorting-associated protein 9A 
 zma-u.5   100273143   uncharacterized LOC100273143 
 zma-u.5   103638692   uncharacterized LOC103638692 

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Top 50 coexpressed genes to 100791462 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100791462 (gma-u.5 coexpression data)

CoexMap"100791462"


gmaLOC100791462 | Entrez gene ID : 100791462    
Species gma mtr ppo ath vvi sly osa zma bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 4 1 2 1 2 1 2 3 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0016192 [list] [network] vesicle-mediated transport  (892 genes)  IEA  
GO CC
GO:0030139 [list] [network] endocytic vesicle  (8 genes)  IEA  
GO:0005829 [list] [network] cytosol  (1702 genes)  IEA  
GO MF
GO:0031267 [list] [network] small GTPase binding  (49 genes)  IEA  
GO:0005085 [list] [network] guanyl-nucleotide exchange factor activity  (76 genes)  IEA  
Protein XP_003523864.3 [sequence] [blastp]
Subcellular
localization
wolf
cyto 5,  nucl 2,  mito 1,  cysk_nucl 1  (predict for XP_003523864.3)
Subcellular
localization
TargetP
other 7  (predict for XP_003523864.3)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100791462
gma-r.7
for
100791462
gma-u.5
for
100810958
gma-u.5
for
100792686
mtr-u.5
for
11418024
ppo-u.5
for
7469119
ppo-u.5
for
18108389
ath-u.5
for
VPS9A
vvi-u.5
for
100251775
vvi-u.5
for
100252293
sly-u.5
for
101253937
osa-u.5
for
4332330
osa-u.5
for
4334742
zma-u.5
for
103640344
zma-u.5
for
100273143
zma-u.5
for
103638692


Ortholog ID: 3692
Species gma gma mtr ppo ppo ath bra bra vvi vvi ghi ghi bna bna cit cit sly sot nta nta osa osa zma zma tae tae hvu hvu sbi sbi bdi bdi cre
Symbol LOC100792686 LOC100791462 LOC11418024 LOC7469119 LOC18108389 VPS9A LOC103847200 LOC103869423 LOC100251775 LOC100252293 LOC107909145 LOC107928349 LOC106425129 LOC125593177 LOC102607631 LOC102616105 LOC101253937 LOC102601378 LOC107829347 LOC107831518 LOC4332330 LOC4334742 LOC103640344 LOC100216675 LOC123114262 LOC123123747 LOC123449090 LOC123395031 LOC8054296 LOC8079642 LOC100836925 LOC100837211 CHLRE_12g547450v5
Function* vacuolar protein sorting-associated protein 9A vacuolar protein sorting-associated protein 9A vacuolar protein sorting-associated protein 9A vacuolar protein sorting-associated protein 9A vacuolar protein sorting-associated protein 9A Vacuolar sorting protein 9 (VPS9) domain-containing protein vacuolar protein sorting-associated protein 9A vacuolar protein sorting-associated protein 9A vacuolar protein sorting-associated protein 9A vacuolar protein sorting-associated protein 9A vacuolar protein sorting-associated protein 9A vacuolar protein sorting-associated protein 9A vacuolar protein sorting-associated protein 9A vacuolar protein sorting-associated protein 9A-like vacuolar protein sorting-associated protein 9A-like vacuolar protein sorting-associated protein 9A-like vacuolar protein sorting-associated protein 9A vacuolar protein sorting-associated protein 9A-like vacuolar protein sorting-associated protein 9A-like vacuolar protein sorting-associated protein 9A vacuolar protein sorting-associated protein 9A vacuolar protein sorting-associated protein 9A vacuolar protein sorting-associated protein 9A uncharacterized LOC100216675 vacuolar protein sorting-associated protein 9A vacuolar protein sorting-associated protein 9A vacuolar protein sorting-associated protein 9A-like vacuolar protein sorting-associated protein 9A-like vacuolar protein sorting-associated protein 9A vacuolar protein sorting-associated protein 9A vacuolar protein sorting-associated protein 9A vacuolar protein sorting-associated protein 9A uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00941 Flavonoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00190 Oxidative phosphorylation 5
ppo04142 Lysosome 5
ppo04145 Phagosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04144 Endocytosis 4
ghi04145 Phagosome 4
ghi04148 Efferocytosis 4
ghi00062 Fatty acid elongation 2
ghi01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04144 Endocytosis 4
ghi04145 Phagosome 4
ghi04148 Efferocytosis 4
ghi00062 Fatty acid elongation 2
ghi01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00730 Thiamine metabolism 2
bna01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04120 Ubiquitin mediated proteolysis 2
cit00510 N-Glycan biosynthesis 2
cit04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04136 Autophagy - other 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04136 Autophagy - other 3
nta00600 Sphingolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04144 Endocytosis 2
sbi04075 Plant hormone signal transduction 2
sbi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03015 mRNA surveillance pathway 2
bdi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04075 Plant hormone signal transduction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100792686 100791462 11418024 7469119 18108389 821514 103847200 103869423 100251775 100252293 107909145 107928349 106425129 125593177 102607631 102616105 101253937 102601378 107829347 107831518 4332330 4334742 103640344 100216675 123114262 123123747 123449090 123395031 8054296 8079642 100836925 100837211 5719607
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