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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100792308   polypyrimidine tract-binding protein homolog 1 
 gma-r.7   100792308   polypyrimidine tract-binding protein homolog 1 
 gma-m.5   100792308   polypyrimidine tract-binding protein homolog 1 
 gma-u.5   100788927   polypyrimidine tract-binding protein homolog 1 
 mtr-u.5   11420325   polypyrimidine tract-binding protein homolog 1 
 ppo-u.5   18097705   polypyrimidine tract-binding protein homolog 1 
 ppo-u.5   7495985   polypyrimidine tract-binding protein homolog 1 
 ath-u.5   PTB1   polypyrimidine tract-binding protein 1 
 vvi-u.5   100266445   polypyrimidine tract-binding protein homolog 1 
 sly-u.5   101251347   polypyrimidine tract-binding protein homolog 1 
 osa-u.5   4332960   polypyrimidine tract-binding protein homolog 1 
 osa-u.5   4345664   polypyrimidine tract-binding protein homolog 1 
 zma-u.5   103653473   polypyrimidine tract-binding protein homolog 1 
 zma-u.5   100381791   uncharacterized LOC100381791 
 zma-u.5   100275742   uncharacterized LOC100275742 

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Top 50 coexpressed genes to 100792308 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100792308 (gma-u.5 coexpression data)

CoexMap"100792308"


gmaLOC100792308 | Entrez gene ID : 100792308    
Species gma mtr ppo ath vvi sly osa zma bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 4 1 2 1 1 1 2 3 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0043484 [list] [network] regulation of RNA splicing  (62 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (5531 genes)  IEA  
GO MF
GO:0003729 [list] [network] mRNA binding  (563 genes)  IEA  
Protein XP_003552536.1 [sequence] [blastp]
XP_006602914.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  nucl 3  (predict for XP_003552536.1)
chlo 5,  chlo_mito 4,  nucl 2,  mito 1  (predict for XP_006602914.1)
Subcellular
localization
TargetP
other 4  (predict for XP_003552536.1)
other 4  (predict for XP_006602914.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100792308
gma-r.7
for
100792308
gma-m.5
for
100792308
gma-u.5
for
100788927
mtr-u.5
for
11420325
ppo-u.5
for
18097705
ppo-u.5
for
7495985
ath-u.5
for
PTB1
vvi-u.5
for
100266445
sly-u.5
for
101251347
osa-u.5
for
4332960
osa-u.5
for
4345664
zma-u.5
for
103653473
zma-u.5
for
100381791
zma-u.5
for
100275742


Ortholog ID: 5515
Species gma gma mtr ppo ppo ath bra vvi ghi ghi bna bna cit sly sot nta nta osa osa zma zma tae tae hvu hvu sbi sbi bdi bdi
Symbol LOC100788927 LOC100792308 LOC11420325 LOC18097705 LOC7495985 PTB1 LOC103870954 LOC100266445 LOC107890457 LOC107949175 LOC106453255 LOC125574894 LOC102618721 LOC101251347 PTB7 LOC107804795 LOC107787487 LOC4345664 LOC4332960 LOC100275742 LOC100381791 LOC123160611 LOC123097400 LOC123413547 LOC123448524 LOC8080760 LOC8075667 LOC100829820 LOC100836521
Function* polypyrimidine tract-binding protein homolog 1 polypyrimidine tract-binding protein homolog 1 polypyrimidine tract-binding protein homolog 1 polypyrimidine tract-binding protein homolog 1 polypyrimidine tract-binding protein homolog 1 polypyrimidine tract-binding protein 1 polypyrimidine tract-binding protein homolog 1 polypyrimidine tract-binding protein homolog 1 polypyrimidine tract-binding protein homolog 1 polypyrimidine tract-binding protein homolog 1 polypyrimidine tract-binding protein homolog 1 polypyrimidine tract-binding protein homolog 1 polypyrimidine tract-binding protein homolog 1 polypyrimidine tract-binding protein homolog 1 polypyrimidine tract-binding protein homolog 1-like polypyrimidine tract-binding protein homolog 1 polypyrimidine tract-binding protein homolog 1 polypyrimidine tract-binding protein homolog 1 polypyrimidine tract-binding protein homolog 1 uncharacterized LOC100275742 uncharacterized LOC100381791 polypyrimidine tract-binding protein homolog 1 polypyrimidine tract-binding protein homolog 1 polypyrimidine tract-binding protein homolog 1-like polypyrimidine tract-binding protein homolog 1-like polypyrimidine tract-binding protein homolog 1 polypyrimidine tract-binding protein homolog 1 polypyrimidine tract-binding protein homolog 1 polypyrimidine tract-binding protein homolog 1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 8
gma03008 Ribosome biogenesis in eukaryotes 2
gma03083 Polycomb repressive complex 2
gma04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03050 Proteasome 6
ath04141 Protein processing in endoplasmic reticulum 2
ath03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03022 Basal transcription factors 2
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 2
vvi00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 7
cit03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03015 mRNA surveillance pathway 4
sot03040 Spliceosome 4
sot03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 3
nta03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 3
nta03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 3
osa04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 5
osa03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03013 Nucleocytoplasmic transport 2
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 3
tae03015 mRNA surveillance pathway 3
tae05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00010 Glycolysis / Gluconeogenesis 5
tae00620 Pyruvate metabolism 5
tae01200 Carbon metabolism 5
tae01230 Biosynthesis of amino acids 5
tae03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 2
sbi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 2
sbi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03050 Proteasome 10
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100788927 100792308 11420325 18097705 7495985 821129 103870954 100266445 107890457 107949175 106453255 125574894 102618721 101251347 102580655 107804795 107787487 4345664 4332960 100275742 100381791 123160611 123097400 123413547 123448524 8080760 8075667 100829820 100836521
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