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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100792560   33 kDa ribonucleoprotein, chloroplastic 
 gma-r.7   100792560   33 kDa ribonucleoprotein, chloroplastic 
 gma-m.5   100792560   33 kDa ribonucleoprotein, chloroplastic 
 gma-u.5   100803098   28 kDa ribonucleoprotein, chloroplastic-like 
 gma-u.5   100785171   splicing factor U2AF 59 kDa subunit 
 ppo-u.5   7455363   28 kDa ribonucleoprotein, chloroplastic 
 ath-u.5   AT1G01080   RNA-binding (RRM/RBD/RNP motifs) family protein 
 osa-u.5   4344522   28 kDa ribonucleoprotein, chloroplastic 
 zma-u.5   100193009   RNA-binding (RRM/RBD/RNP motifs) family protein 

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Top 50 coexpressed genes to 100792560 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100792560 (gma-u.5 coexpression data)

CoexMap"100792560"


gmaLOC100792560 | Entrez gene ID : 100792560      
Species gma ppo ath osa zma cre mtr ghi cit vvi hvu sly bdi bra sot sbi tae nta bna
Paralog 5 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:1901259 [list] [network] chloroplast rRNA processing  (32 genes)  IEA  
GO CC
GO:0009535 [list] [network] chloroplast thylakoid membrane  (205 genes)  IEA  
GO MF
GO:0003729 [list] [network] mRNA binding  (563 genes)  IEA  
Protein XP_003528766.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  mito 1  (predict for XP_003528766.1)
Subcellular
localization
TargetP
chlo 9  (predict for XP_003528766.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100792560

.
gma-r.7
for
100792560

.
gma-m.5
for
100792560

.
gma-u.5
for
100803098

.
gma-u.5
for
100785171

.
ppo-u.5
for
7455363

.
ath-u.5
for
AT1G01080

.
osa-u.5
for
4344522

.
zma-u.5
for
100193009

.


Ortholog ID: 12694
Species ath gma gma osa zma bra ppo tae tae hvu bna bna sbi bdi
Symbol AT1G01080 LOC100785171 LOC100803098 LOC4344522 LOC100193009 LOC103844620 LOC7455363 LOC123147546 LOC123169327 LOC123407255 LOC106370898 LOC106400476 LOC8066102 LOC100823068
Function* RNA-binding (RRM/RBD/RNP motifs) family protein splicing factor U2AF 59 kDa subunit 28 kDa ribonucleoprotein, chloroplastic-like 28 kDa ribonucleoprotein, chloroplastic RNA-binding (RRM/RBD/RNP motifs) family protein 28 kDa ribonucleoprotein, chloroplastic 28 kDa ribonucleoprotein, chloroplastic 28 kDa ribonucleoprotein, chloroplastic 28 kDa ribonucleoprotein, chloroplastic 28 kDa ribonucleoprotein, chloroplastic 31 kDa ribonucleoprotein, chloroplastic-like 31 kDa ribonucleoprotein, chloroplastic 28 kDa ribonucleoprotein, chloroplastic 28 kDa ribonucleoprotein, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 7
ath00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 10
zma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 3
tae04141 Protein processing in endoplasmic reticulum 3
tae04144 Endocytosis 3
tae00860 Porphyrin metabolism 3
tae01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00860 Porphyrin metabolism 2
tae01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 10
bna03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 8
bna03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 3
sbi03018 RNA degradation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 839463 100785171 100803098 4344522 100193009 103844620 7455363 123147546 123169327 123407255 106370898 106400476 8066102 100823068
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