ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
gma-u.5	100793289	endoglucanase 25
gma-r.7	100793289	endoglucanase 25
gma-u.5	100807040	endoglucanase 12
gma-u.5	CEL12	endo-1,4-beta-glucancase
gma-u.5	100804055	endoglucanase 25
mtr-u.5	11412111	endoglucanase 25
mtr-u.5	11427002	endoglucanase 12
ppo-u.5	7474386	endoglucanase 12
ppo-u.5	7491486	endoglucanase 25
ath-u.5	GH9A3	glycosyl hydrolase 9A3
ath-u.5	GH9A1	glycosyl hydrolase 9A1
ath-u.5	KOR2	Six-hairpin glycosidases superfamily protein
bra-r.6	103858416	endoglucanase 25
bra-r.6	103852247	endoglucanase 7
bra-r.6	103848388	endoglucanase 25
vvi-u.5	109123547	endoglucanase 25
vvi-u.5	100257176	endoglucanase 12
ghi-r.1	107914187	endoglucanase 25
ghi-r.1	107939379	endoglucanase 25-like
bna-r.1	106406787	endoglucanase 7
bna-r.1	111213397	endoglucanase 25
bna-r.1	106430640	endoglucanase 25
cit-r.1	102625495	endoglucanase 12
cit-r.1	102627125	endoglucanase 25
sly-u.5	101254155	endoglucanase 12
sly-u.5	Cel3	endo-1,4-beta-glucanase
sly-u.5	101244370	endoglucanase 25-like
sot-r.1	102596032	endoglucanase 25-like
sot-r.1	102598742	endoglucanase 12
sot-r.1	102580651	endoglucanase 25-like
nta-r.1	107763290	endoglucanase 12
nta-r.1	107792901	endoglucanase 25-like
nta-r.1	107807901	endoglucanase 25
osa-u.5	4332724	endoglucanase 9-like
osa-u.5	4336284	endoglucanase 12-like
osa-u.5	4334029	endoglucanase 10-like
zma-u.5	100274698	uncharacterized LOC100274698
zma-u.5	100281146	endo-1,4-beta-glucanase
zma-u.5	100501706	Endoglucanase 25
tae-r.2	123085756	endoglucanase 9
tae-r.2	123189651	endoglucanase 12
tae-r.2	123097583	endoglucanase 9
hvu-r.1	123448739	endoglucanase 9-like
hvu-r.1	123447698	endoglucanase 10
hvu-r.1	123427123	endoglucanase 12
sbi-r.1	8080226	endoglucanase 12
sbi-r.1	8155674	endoglucanase 12
sbi-r.1	8085976	endoglucanase 10
bdi-r.1	100846262	endoglucanase 12
bdi-r.1	100842910	endoglucanase 10
bdi-r.1	100834535	endoglucanase 9

Top 50 coexpressed genes to 100793289 (gma-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 100793289 (gma-u.5 coexpression data)

CoexMap"100793289"

[Cytoscape]

Annotation

functional annotation

KEGG

gmx00500 [list] [network] Starch and sucrose metabolism (292 genes)

GO BP

GO:0005975 [list] [network] carbohydrate metabolic process

(1295 genes)

IEA

GO CC

GO MF

GO:0004553 [list] [network] hydrolase activity, hydrolyzing O-glycosyl compounds

(691 genes)

IEA

Protein

XP_003546229.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 3, nucl 2, plas 2, chlo_mito 2, cysk_nucl 1, mito_plas 1

(predict for XP_003546229.1)

Subcellular
localization
TargetP

other 9

(predict for XP_003546229.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	gma-u.5 for 100793289	gma-r.7 for 100793289	gma-u.5 for 100807040	gma-u.5 for CEL12	gma-u.5 for 100804055	mtr-u.5 for 11412111	mtr-u.5 for 11427002	ppo-u.5 for 7474386	ppo-u.5 for 7491486	ath-u.5 for GH9A3	ath-u.5 for GH9A1	ath-u.5 for KOR2	bra-r.6 for 103858416	bra-r.6 for 103852247	bra-r.6 for 103848388	vvi-u.5 for 109123547	vvi-u.5 for 100257176	ghi-r.1 for 107914187	ghi-r.1 for 107939379	bna-r.1 for 106406787	bna-r.1 for 111213397	bna-r.1 for 106430640	cit-r.1 for 102625495	cit-r.1 for 102627125	sly-u.5 for 101254155	sly-u.5 for Cel3	sly-u.5 for 101244370	sot-r.1 for 102596032	sot-r.1 for 102598742	sot-r.1 for 102580651	nta-r.1 for 107763290	nta-r.1 for 107792901	nta-r.1 for 107807901	osa-u.5 for 4332724	osa-u.5 for 4336284	osa-u.5 for 4334029	zma-u.5 for 100274698	zma-u.5 for 100281146	zma-u.5 for 100501706	tae-r.2 for 123085756	tae-r.2 for 123189651	tae-r.2 for 123097583	hvu-r.1 for 123448739	hvu-r.1 for 123447698	hvu-r.1 for 123427123	sbi-r.1 for 8080226	sbi-r.1 for 8155674	sbi-r.1 for 8085976	bdi-r.1 for 100846262	bdi-r.1 for 100842910	bdi-r.1 for 100834535

Ortholog

Ortholog ID: 1182

Species

gma

mtr

ppo

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

CEL12

GH9A3

GH9A1

KOR2

Cel3

Function^*

endoglucanase 12

endo-1,4-beta-glucancase

endoglucanase 25

endoglucanase 12

endoglucanase 25

endoglucanase 12

glycosyl hydrolase 9A3

glycosyl hydrolase 9A1

Six-hairpin glycosidases superfamily protein

endoglucanase 7

endoglucanase 25

endoglucanase 12

endoglucanase 25-like

endoglucanase 25

endoglucanase 21

endoglucanase 12

endoglucanase 25

endoglucanase 12

endo-1,4-beta-glucanase

endoglucanase 25-like

endoglucanase 12

endoglucanase 25-like

endoglucanase 25

endoglucanase 25-like

endoglucanase 9-like

endoglucanase 12-like

endoglucanase 10-like

uncharacterized LOC100274698

endo-1,4-beta-glucanase

uncharacterized LOC103642232

endoglucanase 12

endoglucanase 9

endoglucanase 10

endoglucanase 9-like

endoglucanase 10

endoglucanase 12

endoglucanase 9

endoglucanase 12

endoglucanase 10

endoglucanase 9

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00130	Ubiquinone and other terpenoid-quinone biosynthesis	2
gma01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma01250	Biosynthesis of nucleotide sugars	4
gma00520	Amino sugar and nucleotide sugar metabolism	3
gma01240	Biosynthesis of cofactors	3
gma00053	Ascorbate and aldarate metabolism	2
gma00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00730	Thiamine metabolism	2
gma01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra01200	Carbon metabolism	6
bra00630	Glyoxylate and dicarboxylate metabolism	5
bra00380	Tryptophan metabolism	3
bra04016	MAPK signaling pathway - plant	3
bra04146	Peroxisome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00500	Starch and sucrose metabolism	4
ghi00520	Amino sugar and nucleotide sugar metabolism	2
ghi01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00500	Starch and sucrose metabolism	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00500	Starch and sucrose metabolism	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00500	Starch and sucrose metabolism	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00940	Phenylpropanoid biosynthesis	4
sot00941	Flavonoid biosynthesis	3
sot00945	Stilbenoid, diarylheptanoid and gingerol biosynthesis	3
sot00360	Phenylalanine metabolism	3
sot00902	Monoterpenoid biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04075	Plant hormone signal transduction	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00040	Pentose and glucuronate interconversions	3
osa00053	Ascorbate and aldarate metabolism	3
osa00520	Amino sugar and nucleotide sugar metabolism	3
osa00541	Biosynthesis of various nucleotide sugars	3
osa01240	Biosynthesis of cofactors	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00500	Starch and sucrose metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00500	Starch and sucrose metabolism	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00500	Starch and sucrose metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00500	Starch and sucrose metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00500	Starch and sucrose metabolism	4
tae04145	Phagosome	3
tae04517	IgSF CAM signaling	3
tae04814	Motor proteins	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00970	Aminoacyl-tRNA biosynthesis	2
sbi00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04141	Protein processing in endoplasmic reticulum	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00520	Amino sugar and nucleotide sugar metabolism	5
bdi01250	Biosynthesis of nucleotide sugars	5
bdi01240	Biosynthesis of cofactors	4
bdi00040	Pentose and glucuronate interconversions	3
bdi00053	Ascorbate and aldarate metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00500	Starch and sucrose metabolism	2

Expression

Expression pattern

Entrez Gene ID^*

100807040

100037483

100805472

11412111

11427002

7491486

7460657

828527

835035

842872

103852247

103848388

109123547

100257176

107939379

111213397

106388500

106444607

102625495

102627125

101254155

544032

101244370

102596032

102598742

102580651

107792901

107811383

107820555

4332724

4336284

4334029

100274698

100281146

103642232

123045894

123092246

123091027

123448739

123447698

123427123

8155674

8060203

8084557

100846262

100842910

100834535

The preparation time of this page was 0.2 [sec].


Species	gma	mtr	ppo	ath	bra	vvi	ghi	bna	cit	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	5	2	2	3	3	2	2	3	2	3	3	3	3	3	3	3	3	3	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100793289 (gma-u.5 coexpression data)

Top 50 enrichment test to 100793289 (gma-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**