ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
gma-u.5	100793778	protein NDL1
gma-r.7	100793778	protein NDL1
gma-m.5	100793778	protein NDL1
gma-u.5	100804729	pollen-specific protein SF21-like
gma-u.5	100781823	protein NDL2
gma-u.5	100782850	protein NDL1
mtr-u.5	11426490	protein NDL1
mtr-u.5	11419160	protein NDL2
ppo-u.5	7470709	protein NDL2
ppo-u.5	18107680	protein NDL1
ppo-u.5	7463744	protein NDL2
ath-u.5	NDL3	N-MYC downregulated-like 3
ath-u.5	NDL2	N-MYC downregulated-like 2
ath-u.5	NDL1	N-MYC downregulated-like 1
bra-r.6	103856801	protein NDL1
bra-r.6	103855932	protein NDL2
bra-r.6	103842632	protein NDL3
vvi-u.5	100252510	protein NDL2
vvi-u.5	100254362	protein NDL1
ghi-r.1	107906997	protein NDL2
ghi-r.1	107895344	protein NDL1
ghi-r.1	107958888	protein NDL2
bna-r.1	106358518	protein NDL2
bna-r.1	106383660	protein NDL2
bna-r.1	106371478	protein NDL1
cit-r.1	102621005	protein NDL1
cit-r.1	102608033	protein NDL2
sly-u.5	101255415	protein NDL1-like
sly-u.5	101262545	protein NDL2
sly-u.5	101266512	protein NDL1-like
sot-r.1	102578674	pollen-specific protein SF21-like
sot-r.1	102592095	pollen-specific protein SF21-like
sot-r.1	102603886	pollen-specific protein SF21-like
nta-r.1	107830926	protein NDL1
nta-r.1	107827060	protein NDL2
nta-r.1	107795065	protein NDL1
osa-u.5	4341312	protein NDL1
osa-u.5	4327306	protein NDL2
osa-u.5	4328772	protein NDL1
zma-u.5	103628577	protein NDL1
zma-u.5	LOCLOC100383387	uncharacterized LOC100383387
zma-u.5	100272647	pollen-specific protein SF21
tae-r.2	101290587	protein NDL1
tae-r.2	123060369	protein NDL1
tae-r.2	123165957	protein NDL1
hvu-r.1	123407859	protein NDL1-like
hvu-r.1	123442897	protein NDL1-like
hvu-r.1	123404200	protein NDL1-like
sbi-r.1	8073786	pollen-specific protein SF21
sbi-r.1	8066607	pollen-specific protein SF21
sbi-r.1	8061985	pollen-specific protein SF21
bdi-r.1	100828191	protein NDL2
bdi-r.1	100838600	protein NDL1
bdi-r.1	100845470	protein NDL1

Top 50 coexpressed genes to 100793778 (gma-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 100793778 (gma-u.5 coexpression data)

CoexMap"100793778"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_003525308.3 [sequence] [blastp]
XP_040871610.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 4, nucl 1, E.R. 1, cysk_nucl 1, cyto 1, mito 1, plas 1, vacu 1, mito_plas 1, cyto_plas 1	(predict for XP_003525308.3)
extr 4, chlo 2, nucl 1, vacu 1, cyto 1, E.R. 1, cysk_nucl 1, nucl_plas 1, cyto_E.R. 1	(predict for XP_040871610.1)

Subcellular
localization
TargetP

other 9	(predict for XP_003525308.3)
scret 7, other 4	(predict for XP_040871610.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	gma-u.5 for 100793778	gma-r.7 for 100793778	gma-m.5 for 100793778	gma-u.5 for 100804729	gma-u.5 for 100781823	gma-u.5 for 100782850	mtr-u.5 for 11426490	mtr-u.5 for 11419160	ppo-u.5 for 7470709	ppo-u.5 for 18107680	ppo-u.5 for 7463744	ath-u.5 for NDL3	ath-u.5 for NDL2	ath-u.5 for NDL1	bra-r.6 for 103856801	bra-r.6 for 103855932	bra-r.6 for 103842632	vvi-u.5 for 100252510	vvi-u.5 for 100254362	ghi-r.1 for 107906997	ghi-r.1 for 107895344	ghi-r.1 for 107958888	bna-r.1 for 106358518	bna-r.1 for 106383660	bna-r.1 for 106371478	cit-r.1 for 102621005	cit-r.1 for 102608033	sly-u.5 for 101255415	sly-u.5 for 101262545	sly-u.5 for 101266512	sot-r.1 for 102578674	sot-r.1 for 102592095	sot-r.1 for 102603886	nta-r.1 for 107830926	nta-r.1 for 107827060	nta-r.1 for 107795065	osa-u.5 for 4341312	osa-u.5 for 4327306	osa-u.5 for 4328772	zma-u.5 for 103628577	zma-u.5 for LOCLOC100383387	zma-u.5 for 100272647	tae-r.2 for 101290587	tae-r.2 for 123060369	tae-r.2 for 123165957	hvu-r.1 for 123407859	hvu-r.1 for 123442897	hvu-r.1 for 123404200	sbi-r.1 for 8073786	sbi-r.1 for 8066607	sbi-r.1 for 8061985	bdi-r.1 for 100828191	bdi-r.1 for 100838600	bdi-r.1 for 100845470

Ortholog

Ortholog ID: 1481

Species

gma

mtr

ppo

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

NDL3

NDL2

NDL1

Function^*

pollen-specific protein SF21-like

protein NDL1

protein NDL2

protein NDL1

protein NDL2

protein NDL1

protein NDL2

N-MYC downregulated-like 3

N-MYC downregulated-like 2

N-MYC downregulated-like 1

protein NDL2

protein NDL2-like

protein NDL2

protein NDL1

protein NDL2

protein NDL1

protein NDL2

protein NDL1-like

protein NDL2

protein NDL1-like

pollen-specific protein SF21-like

protein NDL2

protein NDL1

protein NDL1-like

protein NDL1

protein NDL2

protein NDL1

pollen-specific protein SF21

uncharacterized LOC100193284

protein NDL1

protein NDL1-like

pollen-specific protein SF21

protein NDL2

protein NDL1

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00051	Fructose and mannose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04130	SNARE interactions in vesicular transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00010	Glycolysis / Gluconeogenesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03460	Fanconi anemia pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00940	Phenylpropanoid biosynthesis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00460	Cyanoamino acid metabolism	5
bna00500	Starch and sucrose metabolism	5
bna00999	Biosynthesis of various plant secondary metabolites	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00561	Glycerolipid metabolism	2
cit00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00230	Purine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00053	Ascorbate and aldarate metabolism	4
nta00520	Amino sugar and nucleotide sugar metabolism	4
nta01240	Biosynthesis of cofactors	4
nta01250	Biosynthesis of nucleotide sugars	4
nta00052	Galactose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00053	Ascorbate and aldarate metabolism	2
nta00520	Amino sugar and nucleotide sugar metabolism	2
nta01240	Biosynthesis of cofactors	2
nta01250	Biosynthesis of nucleotide sugars	2
nta04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00053	Ascorbate and aldarate metabolism	2
nta00520	Amino sugar and nucleotide sugar metabolism	2
nta01240	Biosynthesis of cofactors	2
nta01250	Biosynthesis of nucleotide sugars	2
nta04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00592	alpha-Linolenic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04016	MAPK signaling pathway - plant	2
hvu04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00564	Glycerophospholipid metabolism	3

Expression

Expression pattern

Entrez Gene ID^*

100804729

100782850

100817684

11426490

11419160

7470709

18107680

7463744

816481

831051

835777

103855932

103849015

100252510

100254362

107895344

107929863

121231940

106383660

106387459

106432804

102621005

102608033

101255415

101262545

101266512

102578674

102592095

102603886

107827060

107795065

107764796

4341312

4328772

4338041

103628577

100272647

100193284

123165957

123160092

123144481

123407859

123442897

123404200

8073786

8066607

8061985

100828191

100838600

100845470

The preparation time of this page was 4.1 [sec].


Species	gma	mtr	ppo	ath	bra	vvi	ghi	bna	cit	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	6	2	3	3	3	2	3	3	2	3	3	3	3	3	3	3	3	3	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100793778 (gma-u.5 coexpression data)

Top 50 enrichment test to 100793778 (gma-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**