ATTED-II : GeneCoexpression result

Species	Gene	Description
gma-u.5	100795460	polygalacturonase
gma-r.7	100795460	polygalacturonase
gma-u.5	100810484	exopolygalacturonase
gma-u.5	100800324	exopolygalacturonase
mtr-u.5	25488062	exopolygalacturonase
ath-u.5	AT3G14040	Pectin lyase-like superfamily protein
ath-u.5	AT5G48140	Pectin lyase-like superfamily protein
vvi-u.5	100265436	exopolygalacturonase
sly-u.5	101263150	exopolygalacturonase-like
zma-u.5	100273946	uncharacterized LOC100273946
zma-u.5	103626843	exopolygalacturonase-like

functional annotation

KEGG

GO BP

GO:0005975 [list] [network] carbohydrate metabolic process

(1295 genes)

IEA

GO CC

GO MF

GO:0004650 [list] [network] polygalacturonase activity

(99 genes)

IEA

Protein

XP_003552049.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto 3, extr 3, cyto_nucl 3, nucl 1, E.R. 1

(predict for XP_003552049.1)

Subcellular
localization
TargetP

scret 8

(predict for XP_003552049.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	gma-u.5 for 100795460	gma-r.7 for 100795460	gma-u.5 for 100810484	gma-u.5 for 100800324	mtr-u.5 for 25488062	ath-u.5 for AT3G14040	ath-u.5 for AT5G48140	vvi-u.5 for 100265436	sly-u.5 for 101263150	zma-u.5 for 100273946	zma-u.5 for 103626843

Ortholog ID: 84

Species

gma

ath

ghi

bna

sly

nta

osa

zma

tae

Symbol

Function^*

polygalacturonase

Pectin lyase-like superfamily protein

polygalacturonase-like

exopolygalacturonase clone GBGE184-like

exopolygalacturonase

uncharacterized LOC100273946

exopolygalacturonase

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00040	Pentose and glucuronate interconversions	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00040	Pentose and glucuronate interconversions	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00040	Pentose and glucuronate interconversions	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00040	Pentose and glucuronate interconversions	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00040	Pentose and glucuronate interconversions	2
nta00100	Steroid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00040	Pentose and glucuronate interconversions	8
nta00740	Riboflavin metabolism	2
nta04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00040	Pentose and glucuronate interconversions	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00040	Pentose and glucuronate interconversions	9

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00040	Pentose and glucuronate interconversions	11

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00040	Pentose and glucuronate interconversions	9

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00040	Pentose and glucuronate interconversions	3
tae00940	Phenylpropanoid biosynthesis	2

Expression

Expression pattern

Entrez Gene ID^*

100779556

819973

121221131

106388994

101249539

107769351

107822352

4341515

100273946

118472225

123168013

123144207

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 100795460 (gma-u.5 coexpression data)

Top 50 enrichment test to 100795460 (gma-u.5 coexpression data)


Species	gma	mtr	ath	vvi	sly	zma	bdi	hvu	bra	cit	bna	ppo	sbi	ghi	osa	sot	nta	cre	tae
Paralog	4	1	2	1	1	2	0	0	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100795460 (gma-u.5 coexpression data)

Top 50 enrichment test to 100795460 (gma-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**