ATTED-II : GeneCoexpression result

Species	Gene	Description
gma-u.5	100796073	polyadenylate-binding protein-interacting protein 4
gma-r.7	100796073	polyadenylate-binding protein-interacting protein 4
gma-m.5	100796073	polyadenylate-binding protein-interacting protein 4
gma-u.5	100782491	polyadenylate-binding protein-interacting protein 3
gma-u.5	100812754	polyadenylate-binding protein-interacting protein 3
gma-u.5	100778053	polyadenylate-binding protein-interacting protein 3
mtr-u.5	25500533	polyadenylate-binding protein-interacting protein 3
mtr-u.5	11435252	polyadenylate-binding protein-interacting protein 3
ppo-u.5	7478359	polyadenylate-binding protein-interacting protein 3
ppo-u.5	7478112	polyadenylate-binding protein-interacting protein 3
ath-u.5	CID4	CTC-interacting domain 4
ath-u.5	CID3	CTC-interacting domain 3
vvi-u.5	100265239	polyadenylate-binding protein-interacting protein 4
sly-u.5	101261127	polyadenylate-binding protein-interacting protein 4
sly-u.5	101259622	polyadenylate-binding protein-interacting protein 4
osa-u.5	4329365	polyadenylate-binding protein-interacting protein 4
zma-u.5	103654662	polyadenylate-binding protein-interacting protein 4
zma-u.5	100502245	Polyadenylate-binding protein-interacting protein 3

Annotation

functional annotation

KEGG

GO BP

GO:0034063 [list] [network] stress granule assembly

(17 genes)

IEA

GO CC

GO:0010494 [list] [network] cytoplasmic stress granule

(13 genes)

IEA

GO MF

GO:0003729 [list] [network] mRNA binding

(563 genes)

IEA

Protein

XP_006583143.1 [sequence] [blastp]
XP_014633175.1 [sequence] [blastp]
XP_014633176.1 [sequence] [blastp]
XP_014633177.1 [sequence] [blastp]
XP_014633178.1 [sequence] [blastp]
XP_014633179.1 [sequence] [blastp]
XP_040873184.1 [sequence] [blastp]
XP_040873185.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 7, pero 1, chlo 1, vacu 1, cyto_pero 1	(predict for XP_006583143.1)
chlo 2, nucl 1, plas 1, vacu 1, E.R. 1, chlo_mito 1, cysk_nucl 1, E.R._vacu 1, E.R._plas 1	(predict for XP_014633175.1)
chlo 2, nucl 1, plas 1, vacu 1, E.R. 1, chlo_mito 1, cysk_nucl 1, E.R._vacu 1, E.R._plas 1	(predict for XP_014633176.1)
chlo 2, nucl 1, plas 1, vacu 1, E.R. 1, chlo_mito 1, cysk_nucl 1, E.R._vacu 1, E.R._plas 1	(predict for XP_014633177.1)
chlo 2, nucl 1, plas 1, vacu 1, E.R. 1, chlo_mito 1, cysk_nucl 1, E.R._vacu 1, E.R._plas 1	(predict for XP_014633178.1)
chlo 2, nucl 1, plas 1, vacu 1, E.R. 1, chlo_mito 1, cysk_nucl 1, E.R._vacu 1, E.R._plas 1	(predict for XP_014633179.1)
chlo 2, nucl 1, plas 1, vacu 1, E.R. 1, chlo_mito 1, cysk_nucl 1, E.R._vacu 1, E.R._plas 1	(predict for XP_040873184.1)
nucl 7, pero 1, chlo 1, vacu 1, cyto_pero 1	(predict for XP_040873185.1)

Subcellular
localization
TargetP

chlo 4, other 4	(predict for XP_006583143.1)
chlo 5, other 4	(predict for XP_014633175.1)
chlo 5, other 4	(predict for XP_014633176.1)
chlo 5, other 4	(predict for XP_014633177.1)
chlo 5, other 4	(predict for XP_014633178.1)
chlo 5, other 4	(predict for XP_014633179.1)
chlo 5, other 4	(predict for XP_040873184.1)
chlo 4, other 4	(predict for XP_040873185.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	gma-u.5 for 100796073	gma-r.7 for 100796073	gma-m.5 for 100796073	gma-u.5 for 100782491	gma-u.5 for 100812754	gma-u.5 for 100778053	mtr-u.5 for 25500533	mtr-u.5 for 11435252	ppo-u.5 for 7478359	ppo-u.5 for 7478112	ath-u.5 for CID4	ath-u.5 for CID3	vvi-u.5 for 100265239	sly-u.5 for 101261127	sly-u.5 for 101259622	osa-u.5 for 4329365	zma-u.5 for 103654662	zma-u.5 for 100502245

Ortholog

Ortholog ID: 3801

Species

gma

mtr

ppo

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

CID3

CID4

Function^*

polyadenylate-binding protein-interacting protein 3

CTC-interacting domain 3

CTC-interacting domain 4