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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100799728   two-component response regulator-like APRR1 
 gma-r.7   100799728   two-component response regulator-like APRR1 
 gma-u.5   100813917   two-component response regulator-like APRR1 
 gma-u.5   100786522   two-component response regulator-like APRR1 
 gma-u.5   TOC1   timing of CAB expression 1 
 mtr-u.5   25488813   two-component response regulator-like APRR1 
 mtr-u.5   25493836   two-component response regulator-like APRR1 
 ppo-u.5   18105787   two-component response regulator-like APRR1 
 ath-u.5   TOC1   CCT motif -containing response regulator protein 
 vvi-u.5   100258790   two-component response regulator-like APRR1 
 sly-u.5   101259425   two-component response regulator-like APRR1 
 sly-u.5   101259163   two-component response regulator-like APRR1 
 osa-u.5   4330000   two-component response regulator-like PRR1 
 zma-u.5   103651094   two-component response regulator-like PRR1 
 zma-u.5   103633683   two-component response regulator-like PRR1 
 zma-u.5   103648678   two-component response regulator-like PRR1 

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Top 50 coexpressed genes to 100799728 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100799728 (gma-u.5 coexpression data)

CoexMap"100799728"


gmaLOC100799728 | Entrez gene ID : 100799728      
Species gma mtr ppo ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 5 2 1 1 1 2 1 3 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG gmx04712 [list] [network] Circadian rhythm - plant (105 genes)
GO BP
GO:0009736 [list] [network] cytokinin-activated signaling pathway  (95 genes)  IEA  
GO:0000160 [list] [network] phosphorelay signal transduction system  (215 genes)  IEA  
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (7243 genes)  IEA  
Protein XP_003523010.1 [sequence] [blastp]
XP_006578567.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for XP_003523010.1)
nucl 10  (predict for XP_006578567.1)
Subcellular
localization
TargetP
other 9  (predict for XP_003523010.1)
other 9  (predict for XP_006578567.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100799728

.
gma-r.7
for
100799728

.
gma-u.5
for
100813917

.
gma-u.5
for
100786522

.
gma-u.5
for
TOC1

.
mtr-u.5
for
25488813

.
mtr-u.5
for
25493836

.
ppo-u.5
for
18105787

.
ath-u.5
for
TOC1

.
vvi-u.5
for
100258790

.
sly-u.5
for
101259425

.
sly-u.5
for
101259163

.
osa-u.5
for
4330000

.
zma-u.5
for
103651094

.
zma-u.5
for
103633683

.
zma-u.5
for
103648678

.


Ortholog ID: 3989
Species ath gma gma sly sly osa zma zma bra bra ppo mtr mtr tae tae hvu ghi ghi bna bna cre sbi sot sot cit bdi
Symbol TOC1 TOC1 LOC100786522 LOC101259163 LOC101259425 LOC4330000 LOC103633683 LOC103651094 LOC103860589 LOC103837378 LOC18105787 LOC25493836 LOC25488813 LOC123144843 LOC123127760 LOC123401310 LOC107886106 LOC107918396 LOC125577741 LOC106382203 CHLRE_16g676421v5 LOC8072479 LOC102582324 LOC102593655 LOC102626186 LOC100831155
Function* CCT motif -containing response regulator protein timing of CAB expression 1 two-component response regulator-like APRR1 two-component response regulator-like APRR1 two-component response regulator-like APRR1 two-component response regulator-like PRR1 two-component response regulator-like PRR1 two-component response regulator-like PRR1 two-component response regulator-like APRR1 two-component response regulator-like APRR1 two-component response regulator-like APRR1 two-component response regulator-like APRR1 two-component response regulator-like APRR1 two-component response regulator-like PRR1 two-component response regulator-like PRR1 two-component response regulator-like PRR1 two-component response regulator-like APRR1 two-component response regulator-like APRR1 two-component response regulator-like APRR1 two-component response regulator-like APRR1 uncharacterized protein two-component response regulator-like PRR1 two-component response regulator-like APRR1 two-component response regulator-like APRR1 two-component response regulator-like APRR1 two-component response regulator-like PRR1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04712 Circadian rhythm - plant 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04712 Circadian rhythm - plant 9
gma00500 Starch and sucrose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04712 Circadian rhythm - plant 8
zma04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04712 Circadian rhythm - plant 6
zma04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04712 Circadian rhythm - plant 4
ppo00562 Inositol phosphate metabolism 2
ppo04070 Phosphatidylinositol signaling system 2
ppo04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04712 Circadian rhythm - plant 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04712 Circadian rhythm - plant 4
bna04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04712 Circadian rhythm - plant 4
bna04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04712 Circadian rhythm - plant 6
sot04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04712 Circadian rhythm - plant 2
cit04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04712 Circadian rhythm - plant 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 836259 100271889 100786522 101259163 101259425 4330000 103633683 103651094 103860589 103837378 18105787 25493836 25488813 123144843 123127760 123401310 107886106 107918396 125577741 106382203 66056676 8072479 102582324 102593655 102626186 100831155
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